RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 E9PMD0 336 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 GFRA3O60609 400 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 STAG3L1P0CL83 205 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
PTCD1-204ENST00000430982 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
PTCD1-204ENST00000430982 ARL2P36404 184 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
PTCD1-204ENST00000430982 GRIN1Q05586 938 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 COASYQ13057 564 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 TFDP1Q14186 410 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 DSC3Q14574 896 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 MXD4Q14582 209 aaPredicted RBP16.86■□□□□ 0.29
PTCD1-204ENST00000430982 PTPAQ15257 358 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 FAM102BQ5T8I3 360 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 FAM43BQ6ZT52 329 aaPredicted RBP16.86■□□□□ 0.29
PTCD1-204ENST00000430982 CATSPER4Q7RTX7 472 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 CABP7Q86V35 215 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 NPAS4Q8IUM7 802 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 P2RX5Q93086 422 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 ASIC4Q96FT7 647 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 USP28Q96RU2 1077 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 RGS18Q9NS28 235 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 KIAA1671Q9BY89 1806 aa16.86■□□□□ 0.29
PTCD1-204ENST00000430982 ZSCAN22P10073 491 aaPredicted RBP16.85■□□□□ 0.29
PTCD1-204ENST00000430982 PDIA4P13667 645 aaKnown RBP16.85■□□□□ 0.29
PTCD1-204ENST00000430982 CYP11B2P19099 503 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 UBA7P41226 1012 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 PHKA2P46019 1235 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 SIGLEC14Q08ET2 396 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 BECN1Q14457 450 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 SLC24A5Q71RS6 500 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 SRGAP1Q7Z6B7 1085 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 EFHBQ8N7U6 833 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 AK8Q96MA6 479 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 PNMA5Q96PV4 448 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 IFT122Q9HBG6 1241 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 PLAGL2Q9UPG8 496 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 PCDHB7Q9Y5E2 793 aa16.85■□□□□ 0.29
PTCD1-204ENST00000430982 DCHS1Q96JQ0 3298 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 C9IYK1 514 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 PROB1E7EW31 1015 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 GLP2RO95838 553 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 SSBP05455 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
PTCD1-204ENST00000430982 GLRA2P23416 452 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 LONP1P36776 959 aaKnown RBP16.84■□□□□ 0.29
PTCD1-204ENST00000430982 CAPSQ13938 189 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 FOXD4L6Q3SYB3 417 aaPredicted RBP16.84■□□□□ 0.29
PTCD1-204ENST00000430982 FOXD4L3Q6VB84 417 aaPredicted RBP16.84■□□□□ 0.29
PTCD1-204ENST00000430982 KCNK18Q7Z418 384 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 CRIPAKQ8N1N5 446 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 RASSF8Q8NHQ8 419 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 ZNF396Q96N95 335 aaPredicted RBP16.84■□□□□ 0.29
PTCD1-204ENST00000430982 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
PTCD1-204ENST00000430982 PIN4Q9Y237 131 aaKnown RBP16.84■□□□□ 0.29
PTCD1-204ENST00000430982 LRRIQ4A6NIV6 560 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 F13A1P00488 732 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 DNAJB1P25685 340 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 NDUFV1P49821 464 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 VCPP55072 806 aaKnown RBP16.83■□□□□ 0.28
PTCD1-204ENST00000430982 PKP1Q13835 747 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 STK38Q15208 465 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 NAALADL2Q58DX5 795 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 HYIQ5T013 277 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 RNF169Q8NCN4 708 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 CALML4Q96GE6 196 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 IRF2BPLQ9H1B7 796 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 MINDY3Q9H8M7 445 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 POLD4Q9HCU8 107 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 FAM86C1Q9NVL1 165 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
PTCD1-204ENST00000430982 DACT1Q9NYF0 836 aa16.83■□□□□ 0.28
PTCD1-204ENST00000430982 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.28
PTCD1-204ENST00000430982 ARID2Q68CP9 1835 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 INO80B-WBP1J3KQ70 363 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 DGKIO75912 1065 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 GATMP50440 423 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 PTENP60484 403 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 BTG3Q14201 252 aaPredicted RBP16.82■□□□□ 0.28
PTCD1-204ENST00000430982 TMEM119Q4V9L6 283 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 PAN2Q504Q3 1202 aaKnown RBP16.82■□□□□ 0.28
PTCD1-204ENST00000430982 SPECC1Q5M775 1068 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 TWF2Q6IBS0 349 aaKnown RBP16.82■□□□□ 0.28
PTCD1-204ENST00000430982 ADGRD2Q7Z7M1 963 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 CLIC6Q96NY7 704 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 RUSC1Q9BVN2 902 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 IGFLR1Q9H665 355 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 CHST12Q9NRB3 414 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 FBXO2Q9UK22 296 aaPredicted RBP16.82■□□□□ 0.28
PTCD1-204ENST00000430982 SRPRBQ9Y5M8 271 aaKnown RBP16.82■□□□□ 0.28
PTCD1-204ENST00000430982 LOXHD1Q8IVV2 1947 aa16.82■□□□□ 0.28
PTCD1-204ENST00000430982 SLC26A4O43511 780 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 ERLIN2O94905 339 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 ITGB1P05556 798 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 AVPR2P30518 371 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 NASPP49321 788 aaPredicted RBP16.81■□□□□ 0.28
PTCD1-204ENST00000430982 NUBP1P53384 320 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 FAM189BP81408 668 aa16.81■□□□□ 0.28
PTCD1-204ENST00000430982 POU5F1BQ06416 359 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms