RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PTPAQ15257 358 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 PLPP4Q5VZY2 271 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 LRRC43Q8N309 656 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 MICAL1Q8TDZ2 1067 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 TCP11Q8WWU5 503 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 CPB2Q96IY4 423 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 ZNF558Q96NG5 402 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 TLR9Q9NR96 1032 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 TFIP11Q9UBB9 837 aaKnown RBP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 INPP5FQ9Y2H2 1132 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 PCDHB2Q9Y5E7 798 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 HIDE1A8MVS5 230 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 MBTPS2O43462 519 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 ZNF623O75123 536 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 PRPHP41219 470 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 PTENP60484 403 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 PLCB3Q01970 1234 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 EXOC8Q8IYI6 725 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 SLC39A11Q8N1S5 342 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 BCL7CQ8WUZ0 217 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 MRPS27Q92552 414 aaKnown RBP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 CHAMP1Q96JM3 812 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 MSLNLQ96KJ4 702 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 EIF2AQ9BY44 585 aaKnown RBP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 POLR3FQ9H1D9 316 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 NRDE2Q9H7Z3 1164 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 DNAJB4Q9UDY4 337 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 RAPGEFL1Q9UHV5 662 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 BARX2Q9UMQ3 279 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 ASAP2O43150 1006 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 GAS2O43903 313 aaKnown RBP18.8■□□□□ 0.6
UBE3D-204ENST00000430071 BMP15O95972 392 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 BCAR1P56945 870 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 NUCB2P80303 420 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 UBE3AQ05086 875 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 AMHR2Q16671 573 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 CDR2LQ86X02 465 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-204ENST00000430071 ZNF280BQ86YH2 543 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 EFHBQ8N7U6 833 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 SMG8Q8ND04 991 aaKnown RBP18.8■□□□□ 0.6
UBE3D-204ENST00000430071 ZNF396Q96N95 335 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-204ENST00000430071 IPO9Q96P70 1041 aaKnown RBP18.8■□□□□ 0.6
UBE3D-204ENST00000430071 POLR3CQ9BUI4 534 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-204ENST00000430071 RNF39Q9H2S5 420 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 TLE6Q9H808 572 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 TUFT1Q9NNX1 390 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 TBC1D13Q9NVG8 400 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 SPG21Q9NZD8 308 aa18.8■□□□□ 0.6
UBE3D-204ENST00000430071 DOCK6Q96HP0 2047 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 B4GALT5O43286 388 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 TSPAN1O60635 241 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 ZC3H11AO75152 810 aaKnown RBP eCLIP18.79■□□□□ 0.6
UBE3D-204ENST00000430071 DGAT1O75907 488 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 NASPP49321 788 aaPredicted RBP18.79■□□□□ 0.6
UBE3D-204ENST00000430071 NDUFV1P49821 464 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 DNM1Q05193 864 aaKnown RBP18.79■□□□□ 0.6
UBE3D-204ENST00000430071 MBTD1Q05BQ5 628 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 NOMO2Q5JPE7 1267 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 ARL6IP4Q66PJ3 421 aaKnown RBP18.79■□□□□ 0.6
UBE3D-204ENST00000430071 MRPL10Q7Z7H8 261 aaKnown RBP18.79■□□□□ 0.6
UBE3D-204ENST00000430071 BSNDQ8WZ55 320 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 CIZ1Q9ULV3 898 aaPredicted RBP18.79■□□□□ 0.6
UBE3D-204ENST00000430071 HES2Q9Y543 173 aa18.79■□□□□ 0.6
UBE3D-204ENST00000430071 PLXNA3P51805 1871 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 TTLL13PA6NNM8 815 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 PP2D1A8MPX8 630 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 INO80B-WBP1J3KQ70 363 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 NCK2O43639 380 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 DDHD2O94830 711 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 RPA1P27694 616 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 GRIN1Q05586 938 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 MXD4Q14582 209 aaPredicted RBP18.78■□□□□ 0.6
UBE3D-204ENST00000430071 SLC39A14Q15043 492 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 DTHD1Q6ZMT9 781 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 IFNLR1Q8IU57 520 aaPredicted RBP18.78■□□□□ 0.6
UBE3D-204ENST00000430071 IGSF22Q8N9C0 903 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 AUTS2Q8WXX7 1259 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 TCF25Q9BQ70 676 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 VN1R3Q9BXE9 311 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 GBP3Q9H0R5 595 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 CD207Q9UJ71 328 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 LZTS1Q9Y250 596 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 USP20Q9Y2K6 914 aa18.78■□□□□ 0.6
UBE3D-204ENST00000430071 C2orf16Q68DN1 1984 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 MTCL1Q9Y4B5 1905 aaKnown RBP18.77■□□□□ 0.6
UBE3D-204ENST00000430071 VWA3AA6NCI4 1184 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 XRCC6P12956 609 aaKnown RBP eCLIP18.77■□□□□ 0.6
UBE3D-204ENST00000430071 ARF4P18085 180 aaPredicted RBP18.77■□□□□ 0.6
UBE3D-204ENST00000430071 MARCKSP29966 332 aaPredicted RBP18.77■□□□□ 0.6
UBE3D-204ENST00000430071 CDC25AP30304 524 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 PDIA5Q14554 519 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 DUSP6Q16828 381 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 CSPP1Q1MSJ5 1256 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 GJD3Q8N144 294 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 LINC00301Q8NCQ3 95 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 ENTPD7Q9NQZ7 604 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 MIOSQ9NXC5 875 aa18.77■□□□□ 0.6
UBE3D-204ENST00000430071 DBR1Q9UK59 544 aaKnown RBP18.77■□□□□ 0.6
UBE3D-204ENST00000430071 ERLIN2O94905 339 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms