RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 EIF2AQ9BY44 585 aaKnown RBP19.27■□□□□ 0.68
CTSD-203ENST00000429746 CWH43Q9H720 699 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 ARHGAP28Q9P2N2 729 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 MTUS1Q9ULD2 1270 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 USP20Q9Y2K6 914 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 PCDHB7Q9Y5E2 793 aa19.27■□□□□ 0.68
CTSD-203ENST00000429746 INO80B-WBP1J3KQ70 363 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 EOMESO95936 686 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 NPTX2P47972 431 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 MCM6Q14566 821 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 PAN2Q504Q3 1202 aaKnown RBP19.26■□□□□ 0.67
CTSD-203ENST00000429746 SHC4Q6S5L8 630 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 AGMOQ6ZNB7 445 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 TMEM192Q8IY95 271 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 LPPQ93052 612 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 ASB2Q96Q27 587 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 FIZ1Q96SL8 496 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 DACT1Q9NYF0 836 aa19.26■□□□□ 0.67
CTSD-203ENST00000429746 CNTNAP2Q9UHC6 1331 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 A0A1B0GUA9 196 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 SFI1A8K8P3 1242 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 B4GALT3O60512 393 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 AFF1P51825 1210 aaKnown RBP19.25■□□□□ 0.67
CTSD-203ENST00000429746 ZNF131P52739 623 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
CTSD-203ENST00000429746 BTG3Q14201 252 aaPredicted RBP19.25■□□□□ 0.67
CTSD-203ENST00000429746 STK38Q15208 465 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 E2F4Q16254 413 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 TWF2Q6IBS0 349 aaKnown RBP19.25■□□□□ 0.67
CTSD-203ENST00000429746 CDR2LQ86X02 465 aaPredicted RBP19.25■□□□□ 0.67
CTSD-203ENST00000429746 FIBCD1Q8N539 461 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 KCNN1Q92952 543 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 CALML4Q96GE6 196 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 REEP2Q9BRK0 252 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 NTPCRQ9BSD7 190 aaKnown RBP19.25■□□□□ 0.67
CTSD-203ENST00000429746 KCND2Q9NZV8 630 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 RCOR1Q9UKL0 485 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 COG5Q9UP83 839 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 PCDHB2Q9Y5E7 798 aa19.25■□□□□ 0.67
CTSD-203ENST00000429746 VCANP13611 3396 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 IBSPP21815 317 aaPredicted RBP19.24■□□□□ 0.67
CTSD-203ENST00000429746 AXLP30530 894 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 BMPR1AP36894 532 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 RAD51AP2Q09MP3 1159 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 CAMK1Q14012 370 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 GIT2Q14161 759 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 NT5DC1Q5TFE4 455 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 ATL3Q6DD88 541 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 LARP4BQ92615 738 aaKnown RBP19.24■□□□□ 0.67
CTSD-203ENST00000429746 CDK5RAP3Q96JB5 506 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 PRIMPOLQ96LW4 560 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 TIPINQ9BVW5 301 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 TMEM117Q9H0C3 514 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 RNF39Q9H2S5 420 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 PRDM6Q9NQX0 595 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 DAXXQ9UER7 740 aaPredicted RBP19.24■□□□□ 0.67
CTSD-203ENST00000429746 LRFN2Q9ULH4 789 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 PCDHA7Q9UN72 937 aa19.24■□□□□ 0.67
CTSD-203ENST00000429746 TBKBP1A7MCY6 615 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 H3BNC9 293 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 ABLIM1O14639 778 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 RAB27AP51159 221 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 PEX3P56589 373 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 PPP2R5AQ15172 486 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 EEF1DP3Q658K8 133 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 GPBP1Q86WP2 473 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 HELQQ8TDG4 1101 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 CCDC51Q96ER9 411 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 C2orf40Q9H1Z8 148 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 PDZD7Q9H5P4 517 aa19.23■□□□□ 0.67
CTSD-203ENST00000429746 TYW1Q9NV66 732 aaKnown RBP19.23■□□□□ 0.67
CTSD-203ENST00000429746 PRMT7Q9NVM4 692 aaPredicted RBP19.23■□□□□ 0.67
CTSD-203ENST00000429746 ACKR2O00590 384 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 INPPL1O15357 1258 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 CUTAO60888 179 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 OFD1O75665 1012 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 ERLIN2O94905 339 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 SSBP05455 408 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTSD-203ENST00000429746 PRKCBP05771 671 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 PLS3P13797 630 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 NCLP19338 710 aaKnown RBP19.22■□□□□ 0.67
CTSD-203ENST00000429746 BECN1Q14457 450 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 LONRF3Q496Y0 759 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 NOTUMQ6P988 496 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 MICALL1Q8N3F8 863 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 TMEM161BQ8NDZ6 487 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 FBXO22Q8NEZ5 403 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 SPIRE2Q8WWL2 714 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 DNAJC19Q96DA6 116 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 DRC1Q96MC2 740 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 C17orf75Q9HAS0 396 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 STK17AQ9UEE5 414 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 HES2Q9Y543 173 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 IPPQ9Y573 584 aa19.22■□□□□ 0.67
CTSD-203ENST00000429746 DNAJB1P25685 340 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 NCKAP1LP55160 1127 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 ZBTB8OSQ8IWT0 167 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 RNF169Q8NCN4 708 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 GSTCDQ8NEC7 633 aa19.21■□□□□ 0.67
CTSD-203ENST00000429746 DEPTORQ8TB45 409 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms