RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 CLRN2A0PK11 232 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 PLA2G6O60733 806 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 ITGB5P18084 799 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 VAMP7P51809 220 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 PPP2R2AP63151 447 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 NBPF20Q3BBV1 942 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 EPC2Q52LR7 807 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 MICALCLQ6ZW33 695 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 GLG1Q92896 1179 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 TMEM206Q9H813 350 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 ZDHHC18Q9NUE0 388 aa14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 LARSQ9P2J5 1176 aaKnown RBP14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 CNOT8Q9UFF9 292 aaKnown RBP14.38□□□□□ -0.11
SNRNP200-202ENST00000429650 FAM187AA6NFU0 413 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 FTLP02792 175 aaPredicted RBP14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 KRT71Q3SY84 523 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 SPDYCQ5MJ68 293 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 C11orf63Q6NUN7 778 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 MIER3Q7Z3K6 550 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 FAM160B2Q86V87 743 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 OTUD6BQ8N6M0 293 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 CBWD1Q9BRT8 395 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 LRRC4CQ9HCJ2 640 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 PKD2L1Q9P0L9 805 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 CTTNBP2NLQ9P2B4 639 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 ATP8A1Q9Y2Q0 1164 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 DCDC2CA8MYV0 355 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 PFASO15067 1338 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 P4HA2O15460 535 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 MAPTP10636 758 aaKnown RBP14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 TMOD1P28289 359 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 GCLMP48507 274 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 PPARDQ03181 441 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 CETN1Q12798 172 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 ALCAMQ13740 583 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 DHX34Q14147 1143 aaKnown RBP14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 TCEAL1Q15170 157 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 CLUL1Q15846 466 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 ODF2Q5BJF6 829 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 C1orf220Q5T0J3 134 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 AADACL2Q6P093 401 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 YTHDF3Q7Z739 585 aaKnown RBP14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 C12orf56Q8IXR9 622 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 TMEM174Q8WUU8 243 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 VTI1AQ96AJ9 217 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 SYNGAP1Q96PV0 1343 aa14.37□□□□□ -0.11
SNRNP200-202ENST00000429650 MIF4GDA9UHW6 222 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 P4HBP07237 508 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 CHRNA5P30532 468 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 HSD17B4P51659 736 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 MAGOHP61326 146 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 JAMLQ86YT9 394 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 RPUSD2Q8IZ73 545 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 FLAD1Q8NFF5 587 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 C7orf43Q8WVR3 580 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 FAM151AQ8WW52 585 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 KRT35Q92764 455 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 MAGOHBQ96A72 148 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 CYFIP2Q96F07 1278 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 ACCSQ96QU6 501 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 DEFB129Q9H1M3 183 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 KCNH7Q9NS40 1196 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 GGA2Q9UJY4 613 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 ZHX2Q9Y6X8 837 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 GMNCA6NCL1 334 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 MARCKSL1P49006 195 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 EIF3BP55884 814 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 GPC5P78333 572 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 ZSWIM2Q8NEG5 633 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 PLEKHO2Q8TD55 490 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 EPB41L4BQ9H329 900 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 COL20A1Q9P218 1284 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 FEM1BQ9UK73 627 aa14.36□□□□□ -0.11
SNRNP200-202ENST00000429650 CNTNAP1P78357 1384 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 PHF2O75151 1096 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 PAEPP09466 180 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 PLS3P13797 630 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 RARRES1P49788 294 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 IFFO1Q0D2I5 559 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 ZNF746Q6NUN9 644 aaPredicted RBP14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 UBL4BQ8N7F7 174 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 XXYLT1Q8NBI6 393 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 IL31RAQ8NI17 732 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 KAT5Q92993 513 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 ZSWIM1Q9BR11 485 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 GLIS2Q9BZE0 524 aaPredicted RBP14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 HSPBP1Q9NZL4 362 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 ZNF70Q9UC06 446 aaPredicted RBP14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 RPTORQ8N122 1335 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 KIAA0391O15091 583 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 PPIP5K2O43314 1243 aa14.35□□□□□ -0.11
SNRNP200-202ENST00000429650 RTN2O75298 545 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms