RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 DHX40Q8IX18 779 aaKnown RBP18.73■□□□□ 0.59
LINC00887-203ENST00000429578 DHX38Q92620 1227 aaKnown RBP18.73■□□□□ 0.59
LINC00887-203ENST00000429578 GCOM2Q9BZD3 368 aaPredicted RBP18.73■□□□□ 0.59
LINC00887-203ENST00000429578 GBP3Q9H0R5 595 aa18.73■□□□□ 0.59
LINC00887-203ENST00000429578 FZD8Q9H461 694 aa18.73■□□□□ 0.59
LINC00887-203ENST00000429578 MINDY3Q9H8M7 445 aa18.73■□□□□ 0.59
LINC00887-203ENST00000429578 TYW1Q9NV66 732 aaKnown RBP18.73■□□□□ 0.59
LINC00887-203ENST00000429578 TRAF3IP3Q9Y228 551 aa18.73■□□□□ 0.59
LINC00887-203ENST00000429578 GINS2Q9Y248 185 aa18.73■□□□□ 0.59
LINC00887-203ENST00000429578 INO80B-WBP1J3KQ70 363 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 M0QZ92 97 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 TGFB1I1O43294 461 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 CAND2O75155 1236 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 FXR1P51114 621 aaKnown RBP eCLIP18.72■□□□□ 0.59
LINC00887-203ENST00000429578 CRYBB1P53674 252 aaPredicted RBP18.72■□□□□ 0.59
LINC00887-203ENST00000429578 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 AOPEPQ8N6M6 819 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 OSMRQ99650 979 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 TSG101Q99816 390 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 CELF4Q9BZC1 486 aaKnown RBP18.72■□□□□ 0.59
LINC00887-203ENST00000429578 INO80BQ9C086 356 aaPredicted RBP18.72■□□□□ 0.59
LINC00887-203ENST00000429578 TANC1Q9C0D5 1861 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 RBSNQ9H1K0 784 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 CDHR5Q9HBB8 845 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 ALPK3Q96L96 1907 aa18.72■□□□□ 0.59
LINC00887-203ENST00000429578 SMTNL1A8MU46 457 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 BECN2A8MW95 431 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 IQCF3P0C7M6 154 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 EIF4BP23588 611 aaKnown RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 THPOP40225 353 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 TRIM71Q2Q1W2 868 aaKnown RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 HS2ST1Q7LGA3 356 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 LUZP1Q86V48 1076 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 RNF214Q8ND24 703 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 TOX2Q96NM4 488 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 PRMT7Q9NVM4 692 aaPredicted RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 TRPV2Q9Y5S1 764 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 CDY2AQ9Y6F7 541 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 ACKR2O00590 384 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 TLR3O15455 904 aaKnown RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 CALUO43852 315 aaPredicted RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 PQBP1O60828 265 aaKnown RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 PIGRP01833 764 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 PRKCBP05771 671 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 DARSP14868 501 aaKnown RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 SNRPFP62306 86 aaKnown RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 NCAPHQ15003 741 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 PCBP1Q15365 356 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 FAM187BQ17R55 369 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 EDRF1Q3B7T1 1238 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 SPATA1Q5VX52 437 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 GOLGA5Q8TBA6 731 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 PRIMPOLQ96LW4 560 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 IKZF4Q9H2S9 585 aa18.71■□□□□ 0.59
LINC00887-203ENST00000429578 CGNQ9P2M7 1197 aaKnown RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 ZMYND8Q9ULU4 1186 aaPredicted RBP18.71■□□□□ 0.59
LINC00887-203ENST00000429578 HNRNPDLO14979 420 aaKnown RBP18.7■□□□□ 0.58
LINC00887-203ENST00000429578 CHRNA1P02708 482 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 RBL2Q08999 1139 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 MGAT3Q09327 533 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 FAM26DQ5JW98 314 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 ZPBP2Q6X784 338 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 CAGE1Q8TC20 777 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 DUSP9Q99956 384 aaKnown RBP18.7■□□□□ 0.58
LINC00887-203ENST00000429578 MRPL4Q9BYD3 311 aaKnown RBP18.7■□□□□ 0.58
LINC00887-203ENST00000429578 NFE2L3Q9Y4A8 694 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 CEP290O15078 2479 aa18.7■□□□□ 0.58
LINC00887-203ENST00000429578 CSDE1O75534 798 aaKnown RBP18.69■□□□□ 0.58
LINC00887-203ENST00000429578 EDN1P05305 212 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 CTSHP09668 335 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 CKBP12277 381 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 FKBP3Q00688 224 aaKnown RBP18.69■□□□□ 0.58
LINC00887-203ENST00000429578 TRIM60Q495X7 471 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 CSGALNACT2Q8N6G5 542 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 TMEM40Q8WWA1 233 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 BICD1Q96G01 975 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 PRO3102Q9H379 93 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 AGPAT3Q9NRZ7 376 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 DCDC2CA8MYV0 355 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 GOLGA6L19H0YKK7 550 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 LIG4P49917 911 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 PRPF4BQ13523 1007 aaKnown RBP18.69■□□□□ 0.58
LINC00887-203ENST00000429578 GSE1Q14687 1217 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 NFIL3Q16649 462 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 AMHR2Q16671 573 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 TPD52L1Q16890 204 aaPredicted RBP18.69■□□□□ 0.58
LINC00887-203ENST00000429578 SLC39A4Q6P5W5 647 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 CCDC155Q8N6L0 562 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 TMEM174Q8WUU8 243 aa18.69■□□□□ 0.58
LINC00887-203ENST00000429578 TARS2Q9BW92 718 aaKnown RBP18.69■□□□□ 0.58
LINC00887-203ENST00000429578 SCN5AQ14524 2016 aa18.68■□□□□ 0.58
LINC00887-203ENST00000429578 TISP43B9A030 160 aa18.68■□□□□ 0.58
LINC00887-203ENST00000429578 ERLIN2O94905 339 aa18.68■□□□□ 0.58
LINC00887-203ENST00000429578 SYN1P17600 705 aa18.68■□□□□ 0.58
LINC00887-203ENST00000429578 SFPQP23246 707 aaKnown RBP eCLIP18.68■□□□□ 0.58
LINC00887-203ENST00000429578 RPL13P26373 211 aaKnown RBP18.68■□□□□ 0.58
LINC00887-203ENST00000429578 TLE2Q04725 743 aa18.68■□□□□ 0.58
LINC00887-203ENST00000429578 LRRC26Q2I0M4 334 aa18.68■□□□□ 0.58
LINC00887-203ENST00000429578 ZNF618Q5T7W0 954 aa18.68■□□□□ 0.58
LINC00887-203ENST00000429578 C12orf56Q8IXR9 622 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms