RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PORCNQ9H237 461 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 ARGLU1Q9NWB6 273 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-210ENST00000428307 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-210ENST00000428307 MYH11P35749 1972 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 LRRIQ4A6NIV6 560 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 TMCO5BA8MYB1 307 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 PALMO75781 387 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 SEC31AO94979 1220 aaKnown RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 TGFB3P10600 412 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 FERP16591 822 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 MXI1P50539 228 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 SNRPFP62306 86 aaKnown RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 CBX1P83916 185 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 NFRKBQ6P4R8 1299 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 TRIM50Q86XT4 487 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 GLYCTKQ8IVS8 523 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 FBXO16Q8IX29 292 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 RNF10Q8N5U6 811 aaKnown RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 CAGE1Q8TC20 777 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 TMEM174Q8WUU8 243 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 GLG1Q92896 1179 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 FAM84AQ96KN4 292 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 FGD4Q96M96 766 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 ANKZF1Q9H8Y5 726 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 SNX12Q9UMY4 172 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 IGKV6D-21A0A0A0MT36 114 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 PDE2AO00408 941 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 DDX3XO00571 662 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 SOCS7O14512 581 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 FTCDO95954 541 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 BRDTQ58F21 947 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 TMCO3Q6UWJ1 677 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 METTL7BQ6UX53 244 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 PARD3BQ8TEW8 1205 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 U2AF1L4Q8WU68 220 aaKnown RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 SEPT1Q8WYJ6 367 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 FAM213AQ9BRX8 229 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 TOPORSQ9NS56 1045 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 ARHGAP28Q9P2N2 729 aa11.3□□□□□ -0.6
HDAC9-210ENST00000428307 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
HDAC9-210ENST00000428307 KIAA1217Q5T5P2 1943 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 GLRA2P23416 452 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 USP8P40818 1118 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 NOP2P46087 812 aaKnown RBP11.29□□□□□ -0.6
HDAC9-210ENST00000428307 RTP1P59025 263 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 DRP2Q13474 957 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 COPS5Q92905 334 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 KAT5Q92993 513 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 HVCN1Q96D96 273 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 PNKPQ96T60 521 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 TLR10Q9BXR5 811 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 AZI2Q9H6S1 392 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 SUGCTQ9HAC7 445 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 NRBP2Q9NSY0 501 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 SEPT11Q9NVA2 429 aaKnown RBP11.29□□□□□ -0.6
HDAC9-210ENST00000428307 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 PACSIN2Q9UNF0 486 aaPredicted RBP11.29□□□□□ -0.6
HDAC9-210ENST00000428307 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
HDAC9-210ENST00000428307 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 LRRIQ3A6PVS8 624 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 K7ERI5 159 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 NOP56O00567 594 aaKnown RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 LIG4P49917 911 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 PTPROQ16827 1216 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 EPC2Q52LR7 807 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 PNMA8AQ86V59 439 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 CREG2Q8IUH2 290 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 PPM1KQ8N3J5 372 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 DEPTORQ8TB45 409 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 OSBPL9Q96SU4 736 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 MPHOSPH6Q99547 160 aaKnown RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 NIFKQ9BYG3 293 aaKnown RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 GOLPH3Q9H4A6 298 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 PDGFCQ9NRA1 345 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 DNAJC25-GNG10A0A024R161 153 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 MAPK13O15264 365 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 N4BP1O75113 896 aaKnown RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 ACOT2P49753 483 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 STRN3Q13033 797 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 BMS1Q14692 1282 aaKnown RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 C10orf76Q5T2E6 689 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 LNX1Q8TBB1 728 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 SEMA4DQ92854 862 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 ZBTB45Q96K62 511 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-210ENST00000428307 SPATA33Q96N06 139 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 MROH8Q9H579 483 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 EHD2Q9NZN4 543 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 OTOFQ9HC10 1997 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 PTPRFP10586 1907 aa11.28□□□□□ -0.6
HDAC9-210ENST00000428307 P4HA2O15460 535 aa11.27□□□□□ -0.6
HDAC9-210ENST00000428307 TXNP10599 105 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms