RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 KIFC3Q9BVG8 833 aa17.34■□□□□ 0.37
CLK3P2-201ENST00000427566 SCAND2PQ9GZW5 306 aaPredicted RBP17.34■□□□□ 0.37
CLK3P2-201ENST00000427566 RC3H2Q9HBD1 1191 aaKnown RBP17.34■□□□□ 0.37
CLK3P2-201ENST00000427566 LRRIQ4A6NIV6 560 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 INO80B-WBP1J3KQ70 363 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 TRAK2O60296 914 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 LPXNO60711 386 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 ERLIN2O94905 339 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 ABI1Q8IZP0 508 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 CRIPAKQ8N1N5 446 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 STAMQ92783 540 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 PRDM6Q9NQX0 595 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 CHST12Q9NRB3 414 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 STK17AQ9UEE5 414 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.37
CLK3P2-201ENST00000427566 CHD7Q9P2D1 2997 aa17.33■□□□□ 0.36
CLK3P2-201ENST00000427566 COL6A3P12111 3177 aa17.33■□□□□ 0.36
CLK3P2-201ENST00000427566 A0A1B0GVL5 298 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 BMPR1AP36894 532 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 STAT6P42226 847 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 FAM189BP81408 668 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 ADALQ6DHV7 355 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 KIFAP3Q92845 792 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 DHX58Q96C10 678 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 REEP2Q9BRK0 252 aa17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
CLK3P2-201ENST00000427566 MYMKA6NI61 221 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 H3BNC9 293 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 POLR2DO15514 142 aaKnown RBP17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 PEX3P56589 373 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 POU5F1BQ06416 359 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 GIT2Q14161 759 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 IFNLR1Q8IU57 520 aaPredicted RBP17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 AGPAT5Q9NUQ2 364 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 USP20Q9Y2K6 914 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 A0A0U1RQF3 1178 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 TTLL13PA6NNM8 815 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 HOXA2O43364 376 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 EDN1P05305 212 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 LIG1P18858 919 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 CMA1P23946 247 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 HOXA11P31270 313 aaPredicted RBP17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 NAMPTP43490 491 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 NPTX2P47972 431 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 NCBP1Q09161 790 aaKnown RBP17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 AMHR2Q16671 573 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 CDCA2Q69YH5 1023 aaPredicted RBP17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 SV2BQ7L1I2 683 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 DYMQ7RTS9 669 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 HELQQ8TDG4 1101 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 LPPQ93052 612 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 CPB2Q96IY4 423 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 NFKBIZQ9BYH8 718 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 FAM105AQ9NUU6 356 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 KCND2Q9NZV8 630 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 HCSTQ9UBK5 93 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 KCNH3Q9ULD8 1083 aa17.31■□□□□ 0.36
CLK3P2-201ENST00000427566 TDRD15B5MCY1 1934 aaKnown RBP17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 B4GALT5O43286 388 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 RB1P06400 928 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 SKIP12755 728 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 PFKFB1P16118 471 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 PTPROQ16827 1216 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 DDX12PQ92771 950 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 CLP1Q92989 425 aaKnown RBP17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 IFT74Q96LB3 600 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 DRC1Q96MC2 740 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 C11orf84Q9BUA3 381 aaPredicted RBP17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 TMEM117Q9H0C3 514 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 ALG13Q9NP73 1137 aaKnown RBP17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 TYW1Q9NV66 732 aaKnown RBP17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 FAM13BQ9NYF5 915 aa17.3■□□□□ 0.36
CLK3P2-201ENST00000427566 CCDC169A6NNP5 214 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 TSPAN1O60635 241 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 EOMESO95936 686 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 LINC00271P0C7V0 271 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 POU3F3P20264 500 aaPredicted RBP17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 TAS1R3Q7RTX0 852 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 CDR2LQ86X02 465 aaPredicted RBP17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 ZBTB8OSQ8IWT0 167 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 DEPTORQ8TB45 409 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 DNAJC19Q96DA6 116 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 TIPINQ9BVW5 301 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 CCDC113Q9H0I3 377 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 AAASQ9NRG9 546 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 RNF19AQ9NV58 838 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 LMCD1Q9NZU5 365 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 HPSEQ9Y251 543 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 INPP5FQ9Y2H2 1132 aa17.29■□□□□ 0.36
CLK3P2-201ENST00000427566 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 C5orf67F2Z3F1 127 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 GRM6O15303 877 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 SLC16A4O15374 487 aa17.28■□□□□ 0.36
CLK3P2-201ENST00000427566 KRT18P05783 430 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms