RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 SLC30A5Q8TAD4 765 aa14.03□□□□□ -0.16
SPG11-202ENST00000427534 MUC3BQ9H195 1237 aa14.03□□□□□ -0.16
SPG11-202ENST00000427534 TOGARAM2Q6ZUX3 1019 aa14.03□□□□□ -0.16
SPG11-202ENST00000427534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPG11-202ENST00000427534 VCX3AQ9NNX9 186 aa14.03□□□□□ -0.16
SPG11-202ENST00000427534 RBAKQ9NYW8 714 aaPredicted RBP14.03□□□□□ -0.16
SPG11-202ENST00000427534 SNX24Q9Y343 169 aa14.03□□□□□ -0.16
SPG11-202ENST00000427534 PGRMC1O00264 195 aaKnown RBP14.02□□□□□ -0.16
SPG11-202ENST00000427534 GMPSP49915 693 aaPredicted RBP14.02□□□□□ -0.16
SPG11-202ENST00000427534 SLFN12LQ6IEE8 588 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 NFU1Q9UMS0 254 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 CCL15-CCL14A0A0B4J2E2 113 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 ENDOD1O94919 500 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 ARL4DP49703 201 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 KRT31Q15323 416 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 CCL15Q16663 113 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 ULK4Q96C45 1275 aa14.02□□□□□ -0.16
SPG11-202ENST00000427534 BAATQ14032 418 aaPredicted RBP14.02□□□□□ -0.17
SPG11-202ENST00000427534 TCEA2Q15560 299 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 MFSD4BQ5TF39 518 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 A2ML1A8K2U0 1454 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 DEFB128Q7Z7B8 93 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 DGKHQ86XP1 1220 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 BBOF1Q8ND07 529 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 TEKT4Q8WW24 435 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 RAD54LQ92698 747 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 SRPK1Q96SB4 655 aaKnown RBP14.02□□□□□ -0.17
SPG11-202ENST00000427534 HAUS8Q9BT25 410 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 SLC9A2Q9UBY0 812 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.17
SPG11-202ENST00000427534 TAL1P17542 331 aaPredicted RBP14.02□□□□□ -0.17
SPG11-202ENST00000427534 GUCY1A2P33402 732 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 VAMP7P51809 220 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 GLE1Q53GS7 698 aaKnown RBP14.02□□□□□ -0.17
SPG11-202ENST00000427534 ANKMY2Q8IV38 441 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 MB21D1Q8N884 522 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 RRAGCQ9HB90 399 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 TJP2Q9UDY2 1190 aa14.02□□□□□ -0.17
SPG11-202ENST00000427534 CCNE1P24864 410 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 ATXN3P54252 364 aaPredicted RBP14.01□□□□□ -0.17
SPG11-202ENST00000427534 PTK2BQ14289 1009 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 VSTM4Q8IW00 320 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 DDIASQ8IXT1 998 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 SLC25A41Q8N5S1 370 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 LZICQ8WZA0 190 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 CDC42BPGQ6DT37 1551 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 PPP3CCP48454 512 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 LMNB2Q03252 620 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 THAP9Q9H5L6 903 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 CHORDC1Q9UHD1 332 aaPredicted RBP14.01□□□□□ -0.17
SPG11-202ENST00000427534 IQCA1LA6NCM1 817 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 DNAJB2P25686 324 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 PRCPP42785 496 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 CPA5Q8WXQ8 436 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 RABGGTAQ92696 567 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 FOXN1O15353 648 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 YWHABP31946 246 aaKnown RBP14.01□□□□□ -0.17
SPG11-202ENST00000427534 TNFAIP2Q03169 654 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 FAM49BQ9NUQ9 324 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 VEPH1Q14D04 833 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 GLRA4Q5JXX5 417 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 FAM47EQ6ZV65 393 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 CACUL1Q86Y37 369 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 EFHBQ8N7U6 833 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 C1orf54Q8WWF1 131 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 ZFYVE28Q9HCC9 887 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 ANKRD65E5RJM6 399 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 MAP3K7O43318 606 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 PAMP19021 973 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 MRPL4Q9BYD3 311 aaKnown RBP14.01□□□□□ -0.17
SPG11-202ENST00000427534 SNX9Q9Y5X1 595 aa14.01□□□□□ -0.17
SPG11-202ENST00000427534 ARHGEF37A1IGU5 675 aa14□□□□□ -0.17
SPG11-202ENST00000427534 SPTLC1O15269 473 aa14□□□□□ -0.17
SPG11-202ENST00000427534 SP100P23497 879 aaPredicted RBP14□□□□□ -0.17
SPG11-202ENST00000427534 ARL6IP4Q66PJ3 421 aaKnown RBP14□□□□□ -0.17
SPG11-202ENST00000427534 ZFYVE19Q96K21 471 aa14□□□□□ -0.17
SPG11-202ENST00000427534 ACAP3Q96P50 834 aa14□□□□□ -0.17
SPG11-202ENST00000427534 IQGAP3Q86VI3 1631 aa14□□□□□ -0.17
SPG11-202ENST00000427534 LRRC53A6NM62 1247 aa14□□□□□ -0.17
SPG11-202ENST00000427534 GGPS1O95749 300 aa14□□□□□ -0.17
SPG11-202ENST00000427534 YY1P25490 414 aa14□□□□□ -0.17
SPG11-202ENST00000427534 ZSCAN26Q16670 478 aa14□□□□□ -0.17
SPG11-202ENST00000427534 GOLPH3LQ9H4A5 285 aa14□□□□□ -0.17
SPG11-202ENST00000427534 PCDHB7Q9Y5E2 793 aa14□□□□□ -0.17
SPG11-202ENST00000427534 TAGAPQ8N103 731 aa14□□□□□ -0.17
SPG11-202ENST00000427534 ZNF512Q96ME7 567 aaPredicted RBP14□□□□□ -0.17
SPG11-202ENST00000427534 SH3GLB2Q9NR46 395 aa14□□□□□ -0.17
SPG11-202ENST00000427534 SENP1Q9P0U3 644 aa14□□□□□ -0.17
SPG11-202ENST00000427534 AGAP1Q9UPQ3 857 aa14□□□□□ -0.17
SPG11-202ENST00000427534 PRG3Q9Y2Y8 225 aaPredicted RBP14□□□□□ -0.17
SPG11-202ENST00000427534 CHEK2O96017 543 aa14□□□□□ -0.17
SPG11-202ENST00000427534 QARSP47897 775 aaKnown RBP14□□□□□ -0.17
SPG11-202ENST00000427534 HS6ST3Q8IZP7 471 aa14□□□□□ -0.17
SPG11-202ENST00000427534 ARL8AQ96BM9 186 aa14□□□□□ -0.17
SPG11-202ENST00000427534 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
SPG11-202ENST00000427534 BCAP29Q9UHQ4 241 aa14□□□□□ -0.17
SPG11-202ENST00000427534 UBA3Q8TBC4 463 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 SPIRE2Q8WWL2 714 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 SCHIP1Q9P0W5 487 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms