RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 SEZ6LQ9BYH1 1024 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 PPP1R12CQ9BZL4 782 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 NT5C3AQ9H0P0 336 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 WNT8AQ9H1J5 351 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 LMBRD1Q9NUN5 540 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 TMEM39AQ9NV64 488 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 FAM13BQ9NYF5 915 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 NOD1Q9Y239 953 aa6.35□□□□□ -1.39
HERPUD2-204ENST00000426180 MROH7Q68CQ1 1323 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 SMIM35A0A1B0GVV1 85 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 MYMKA6NI61 221 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 SFI1A8K8P3 1242 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 RSPH10B2B2RC85 870 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 KIAA0355O15063 1070 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 TLR3O15455 904 aaKnown RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 MAGEB2O15479 319 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 HIP1RO75146 1068 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 GPR32O75388 356 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 CSDE1O75534 798 aaKnown RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 CHRNA1P02708 482 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 RSPH10BP0C881 870 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 CKBP12277 381 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 GLRA2P23416 452 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 ARL2P36404 184 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 TXLNAP40222 546 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 CCL23P55773 120 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 MRPS6P82932 125 aaKnown RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 MGAT3Q09327 533 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 GIT2Q14161 759 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 KIZQ2M2Z5 673 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 FAM102BQ5T8I3 360 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 CCDC73Q6ZRK6 1079 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 VASH1Q7L8A9 365 aaPredicted RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 FMR1NBQ8N0W7 255 aaPredicted RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 TMEM40Q8WWA1 233 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 PRPF31Q8WWY3 499 aaKnown RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 SLC7A3Q8WY07 619 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 DNAJC19Q96DA6 116 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 PAGE5Q96GU1 130 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 HTATIP2Q9BUP3 242 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 POLR3FQ9H1D9 316 aaPredicted RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 ADAMTS10Q9H324 1103 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 HIPK3Q9H422 1215 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 ATP6V0A4Q9HBG4 840 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 SUCLA2Q9P2R7 463 aaPredicted RBP6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 DNMT3LQ9UJW3 386 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 AKT3Q9Y243 479 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 CDY2AQ9Y6F7 541 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 DNAH12Q6ZR08 3092 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 ALPK3Q96L96 1907 aa6.34□□□□□ -1.39
HERPUD2-204ENST00000426180 A0A087WZ62 844 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 GOLGA6L4A6NEF3 574 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 TRIM66O15016 1216 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 NBNO60934 754 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 ZNF202O95125 648 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 TIMP1P01033 207 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 SLFN14P0C7P3 912 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 SRGAP2CP0DJJ0 459 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 SELPP16109 830 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 FGFR4P22455 802 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 GUCY2CP25092 1073 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 SYKP43405 635 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 AFMP43652 599 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 GPC3P51654 580 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 EPHB4P54760 987 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 NLRP11P59045 1033 aaKnown RBP6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 UBE2HP62256 183 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 RBL2Q08999 1139 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 LAMTOR4Q0VGL1 99 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 CUL4BQ13620 913 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 CAPSQ13938 189 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 FAM26DQ5JW98 314 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 IER5Q5VY09 327 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 TAF2Q6P1X5 1199 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 KRBA2Q6ZNG9 492 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 SV2BQ7L1I2 683 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 LRRC8DQ7L1W4 858 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 C16orf59Q7L2K0 433 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 DYMQ7RTS9 669 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 RPAINQ86UA6 219 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 RHPN2Q8IUC4 686 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 IQUBQ8NA54 791 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 RETREG2Q8NC44 543 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 GPT2Q8TD30 523 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 ERCC4Q92889 916 aaPredicted RBP6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 BADQ92934 168 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 CCDC43Q96MW1 224 aaKnown RBP6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 REEP2Q9BRK0 252 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 FDXACB1Q9BRP7 624 aaPredicted RBP6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 KIFC3Q9BVG8 833 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 C1QTNF2Q9BXJ5 285 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 FGFBP2Q9BYJ0 223 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 BLZF1Q9H2G9 400 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 MINDY3Q9H8M7 445 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 KBTBD4Q9NVX7 518 aa6.33□□□□□ -1.4
HERPUD2-204ENST00000426180 USP20Q9Y2K6 914 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms