RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 POU5F1BQ06416 359 aa15.08■□□□□ 0
SNX3-204ENST00000426155 PKP1Q13835 747 aa15.08■□□□□ 0
SNX3-204ENST00000426155 KARSQ15046 597 aaKnown RBP15.08■□□□□ 0
SNX3-204ENST00000426155 TMEM119Q4V9L6 283 aa15.08■□□□□ 0
SNX3-204ENST00000426155 SPECC1Q5M775 1068 aa15.08■□□□□ 0
SNX3-204ENST00000426155 RINT1Q6NUQ1 792 aa15.08■□□□□ 0
SNX3-204ENST00000426155 USP49Q70CQ1 688 aa15.08■□□□□ 0
SNX3-204ENST00000426155 LRRC43Q8N309 656 aa15.08■□□□□ 0
SNX3-204ENST00000426155 SMG8Q8ND04 991 aaKnown RBP15.08■□□□□ 0
SNX3-204ENST00000426155 ANP32EQ9BTT0 268 aa15.08■□□□□ 0
SNX3-204ENST00000426155 PLVAPQ9BX97 442 aa15.08■□□□□ 0
SNX3-204ENST00000426155 NFKBIZQ9BYH8 718 aa15.08■□□□□ 0
SNX3-204ENST00000426155 LMCD1Q9NZU5 365 aa15.08■□□□□ 0
SNX3-204ENST00000426155 THEGQ9P2T0 379 aa15.08■□□□□ 0
SNX3-204ENST00000426155 HES2Q9Y543 173 aa15.08■□□□□ 0
SNX3-204ENST00000426155 B4GALT3O60512 393 aa15.07■□□□□ 0
SNX3-204ENST00000426155 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
SNX3-204ENST00000426155 IRS1P35568 1242 aa15.07■□□□□ 0
SNX3-204ENST00000426155 RAB27AP51159 221 aa15.07■□□□□ 0
SNX3-204ENST00000426155 MAPK7Q13164 816 aa15.07■□□□□ 0
SNX3-204ENST00000426155 PTPROQ16827 1216 aa15.07■□□□□ 0
SNX3-204ENST00000426155 TCEAL5Q5H9L2 206 aa15.07■□□□□ 0
SNX3-204ENST00000426155 NOTUMQ6P988 496 aa15.07■□□□□ 0
SNX3-204ENST00000426155 AGMOQ6ZNB7 445 aa15.07■□□□□ 0
SNX3-204ENST00000426155 C1orf186Q6ZWK4 172 aa15.07■□□□□ 0
SNX3-204ENST00000426155 SPPL3Q8TCT6 385 aa15.07■□□□□ 0
SNX3-204ENST00000426155 P2RX5Q93086 422 aa15.07■□□□□ 0
SNX3-204ENST00000426155 CDK5RAP3Q96JB5 506 aa15.07■□□□□ 0
SNX3-204ENST00000426155 CLIC6Q96NY7 704 aa15.07■□□□□ 0
SNX3-204ENST00000426155 CCDC113Q9H0I3 377 aa15.07■□□□□ 0
SNX3-204ENST00000426155 CSRNP2Q9H175 543 aa15.07■□□□□ 0
SNX3-204ENST00000426155 NXF3Q9H4D5 531 aaKnown RBP15.07■□□□□ 0
SNX3-204ENST00000426155 FBXO2Q9UK22 296 aaPredicted RBP15.07■□□□□ 0
SNX3-204ENST00000426155 TRIP11Q15643 1979 aa15.06■□□□□ 0
SNX3-204ENST00000426155 NPHP3-ACAD11A0A0J9YXS1 232 aa15.06■□□□□ 0
SNX3-204ENST00000426155 ZNF623O75123 536 aa15.06■□□□□ 0
SNX3-204ENST00000426155 OFD1O75665 1012 aa15.06■□□□□ 0
SNX3-204ENST00000426155 FGF18O76093 207 aa15.06■□□□□ 0
SNX3-204ENST00000426155 NPTXRO95502 500 aa15.06■□□□□ 0
SNX3-204ENST00000426155 BMP15O95972 392 aa15.06■□□□□ 0
SNX3-204ENST00000426155 PLA2G4BP0C869 781 aa15.06■□□□□ 0
SNX3-204ENST00000426155 PLCG1P19174 1290 aa15.06■□□□□ 0
SNX3-204ENST00000426155 NAMPTP43490 491 aa15.06■□□□□ 0
SNX3-204ENST00000426155 SLC12A3P55017 1021 aa15.06■□□□□ 0
SNX3-204ENST00000426155 FOXD4L6Q3SYB3 417 aaPredicted RBP15.06■□□□□ 0
SNX3-204ENST00000426155 TIGD5Q53EQ6 642 aa15.06■□□□□ 0
SNX3-204ENST00000426155 FOXD4L3Q6VB84 417 aaPredicted RBP15.06■□□□□ 0
SNX3-204ENST00000426155 ZBTB8OSQ8IWT0 167 aa15.06■□□□□ 0
SNX3-204ENST00000426155 THNSL1Q8IYQ7 743 aa15.06■□□□□ 0
SNX3-204ENST00000426155 DEPTORQ8TB45 409 aa15.06■□□□□ 0
SNX3-204ENST00000426155 POF1BQ8WVV4 589 aa15.06■□□□□ 0
SNX3-204ENST00000426155 EPSTI1Q96J88 318 aa15.06■□□□□ 0
SNX3-204ENST00000426155 AK8Q96MA6 479 aa15.06■□□□□ 0
SNX3-204ENST00000426155 APOL6Q9BWW8 343 aa15.06■□□□□ 0
SNX3-204ENST00000426155 TBC1D13Q9NVG8 400 aa15.06■□□□□ 0
SNX3-204ENST00000426155 IPPQ9Y573 584 aa15.06■□□□□ 0
SNX3-204ENST00000426155 CNTNAP2Q9UHC6 1331 aa15.06■□□□□ 0
SNX3-204ENST00000426155 SFI1A8K8P3 1242 aa15.05■□□□□ -0
SNX3-204ENST00000426155 NT5C1B-RDH14C9J2C7 533 aa15.05■□□□□ -0
SNX3-204ENST00000426155 PRKCBP05771 671 aa15.05■□□□□ -0
SNX3-204ENST00000426155 SKIP12755 728 aa15.05■□□□□ -0
SNX3-204ENST00000426155 LAG3P18627 525 aa15.05■□□□□ -0
SNX3-204ENST00000426155 NCLP19338 710 aaKnown RBP15.05■□□□□ -0
SNX3-204ENST00000426155 AXLP30530 894 aa15.05■□□□□ -0
SNX3-204ENST00000426155 GTF2F1P35269 517 aaKnown RBP eCLIP15.05■□□□□ -0
SNX3-204ENST00000426155 LONP1P36776 959 aaKnown RBP15.05■□□□□ -0
SNX3-204ENST00000426155 UBA7P41226 1012 aa15.05■□□□□ -0
SNX3-204ENST00000426155 PEX3P56589 373 aa15.05■□□□□ -0
SNX3-204ENST00000426155 DHX8Q14562 1220 aaKnown RBP15.05■□□□□ -0
SNX3-204ENST00000426155 KCNT2Q6UVM3 1135 aa15.05■□□□□ -0
SNX3-204ENST00000426155 GLB1LQ6UWU2 654 aa15.05■□□□□ -0
SNX3-204ENST00000426155 MRPL10Q7Z7H8 261 aaKnown RBP15.05■□□□□ -0
SNX3-204ENST00000426155 ADGRD2Q7Z7M1 963 aa15.05■□□□□ -0
SNX3-204ENST00000426155 TMEM173Q86WV6 379 aaPredicted RBP15.05■□□□□ -0
SNX3-204ENST00000426155 SYT2Q8N9I0 419 aaPredicted RBP15.05■□□□□ -0
SNX3-204ENST00000426155 KIFAP3Q92845 792 aa15.05■□□□□ -0
SNX3-204ENST00000426155 NT5C3AQ9H0P0 336 aa15.05■□□□□ -0
SNX3-204ENST00000426155 GBP3Q9H0R5 595 aa15.05■□□□□ -0
SNX3-204ENST00000426155 FZD8Q9H461 694 aa15.05■□□□□ -0
SNX3-204ENST00000426155 ZSCAN16Q9H4T2 348 aaPredicted RBP15.05■□□□□ -0
SNX3-204ENST00000426155 PDZD7Q9H5P4 517 aa15.05■□□□□ -0
SNX3-204ENST00000426155 NSUN3Q9H649 340 aaKnown RBP15.05■□□□□ -0
SNX3-204ENST00000426155 RSAD1Q9HA92 442 aa15.05■□□□□ -0
SNX3-204ENST00000426155 BLOC1S4Q9NUP1 217 aa15.05■□□□□ -0
SNX3-204ENST00000426155 PRMT7Q9NVM4 692 aaPredicted RBP15.05■□□□□ -0
SNX3-204ENST00000426155 DNAJB4Q9UDY4 337 aa15.05■□□□□ -0
SNX3-204ENST00000426155 PCDHB12Q9Y5F1 795 aa15.05■□□□□ -0
SNX3-204ENST00000426155 CCDC169A6NNP5 214 aa15.04■□□□□ -0
SNX3-204ENST00000426155 ZC3H11AO75152 810 aaKnown RBP eCLIP15.04■□□□□ -0
SNX3-204ENST00000426155 POMCP01189 267 aa15.04■□□□□ -0
SNX3-204ENST00000426155 ITGA4P13612 1032 aa15.04■□□□□ -0
SNX3-204ENST00000426155 AKAP5P24588 427 aa15.04■□□□□ -0
SNX3-204ENST00000426155 MLH1P40692 756 aa15.04■□□□□ -0
SNX3-204ENST00000426155 NPTX2P47972 431 aa15.04■□□□□ -0
SNX3-204ENST00000426155 KCNQ1P51787 676 aa15.04■□□□□ -0
SNX3-204ENST00000426155 MCM6Q14566 821 aa15.04■□□□□ -0
SNX3-204ENST00000426155 PPP2R5AQ15172 486 aa15.04■□□□□ -0
SNX3-204ENST00000426155 PCBP1Q15365 356 aaKnown RBP eCLIP15.04■□□□□ -0
SNX3-204ENST00000426155 ARSHQ5FYA8 562 aa15.04■□□□□ -0
SNX3-204ENST00000426155 NOMO2Q5JPE7 1267 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms