RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 SV2BQ7L1I2 683 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 GPBP1Q86WP2 473 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 KSR1Q8IVT5 923 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 C7orf61Q8IZ16 206 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 METTL13Q8N6R0 699 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 MCPH1Q8NEM0 835 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 EPS8L1Q8TE68 723 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 TCP11Q8WWU5 503 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 PRPF31Q8WWY3 499 aaKnown RBP7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 STAMQ92783 540 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 DHX58Q96C10 678 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 GBP4Q96PP9 640 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 C7orf25Q9BPX7 421 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 PYM1Q9BRP8 204 aaKnown RBP7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 NTPCRQ9BSD7 190 aaKnown RBP7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 TIPINQ9BVW5 301 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 FAM49AQ9H0Q0 323 aaPredicted RBP7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 WNT8AQ9H1J5 351 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 TNMDQ9H2S6 317 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 HIPK3Q9H422 1215 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 SUGCTQ9HAC7 445 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 MAGEF1Q9HAY2 307 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 ATP6V0A4Q9HBG4 840 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 GPRC5CQ9NQ84 441 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 SUCLA2Q9P2R7 463 aaPredicted RBP7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 NOD1Q9Y239 953 aa7.83□□□□□ -1.16
CHCHD3P1-201ENST00000425516 FRMD3A2A2Y4 597 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 GOLGA6L4A6NEF3 574 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 HIP1RO75146 1068 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 SSBP05455 408 aaKnown RBP eCLIP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 SELPP16109 830 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 MCM4P33991 863 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 THPOP40225 353 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CRYBB1P53674 252 aaPredicted RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 NLRP11P59045 1033 aaKnown RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 MRPS6P82932 125 aaKnown RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CDC42EP1Q00587 391 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 FAM160A1Q05DH4 1040 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 BFSP2Q13515 415 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 DHX8Q14562 1220 aaKnown RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 KIZQ2M2Z5 673 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 PPP2R2DQ66LE6 453 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 MFSD5Q6N075 450 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 KRBA2Q6ZNG9 492 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 MAEAQ7L5Y9 396 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 RSPH3Q86UC2 560 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 ELOA2Q8IYF1 753 aaPredicted RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 GRAMD1CQ8IYS0 662 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 RASSF8Q8NHQ8 419 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 ASAP3Q8TDY4 903 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 TMEM40Q8WWA1 233 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 PSPC1Q8WXF1 523 aaKnown RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 BSNDQ8WZ55 320 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 DPF3Q92784 378 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 EVPLQ92817 2033 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 KIFAP3Q92845 792 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 KCNN1Q92952 543 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 PAGE5Q96GU1 130 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CCDC43Q96MW1 224 aaKnown RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 TIGD1Q96MW7 591 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 FIZ1Q96SL8 496 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 REEP2Q9BRK0 252 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CELF4Q9BZC1 486 aaKnown RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 TRIM9Q9C026 710 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 POLR3FQ9H1D9 316 aaPredicted RBP7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 IFT122Q9HBG6 1241 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 ODF2LQ9ULJ1 636 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 AKT3Q9Y243 479 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 COL4A3BPQ9Y5P4 624 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CDY2AQ9Y6F7 541 aa7.82□□□□□ -1.16
CHCHD3P1-201ENST00000425516 A0A087WZ62 844 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 KLRC4O43908 158 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 NBNO60934 754 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 PARNO95453 639 aaKnown RBP7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CXCL10P02778 98 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CTSHP09668 335 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 DARSP14868 501 aaKnown RBP7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 RAG1P15918 1043 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 SYN1P17600 705 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CASP1P29466 404 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 NPTX2P47972 431 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CCL23P55773 120 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 PTENP60484 403 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 AMPD3Q01432 767 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 EHHADHQ08426 723 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 RAD51AP2Q09MP3 1159 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 TMEM62Q0P6H9 643 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CUL4BQ13620 913 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 CAPSQ13938 189 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 MXD4Q14582 209 aaPredicted RBP7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 LPIN1Q14693 890 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 FBXO47Q5MNV8 452 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 FAM102BQ5T8I3 360 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 ZNF787Q6DD87 383 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 LRRC8DQ7L1W4 858 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 C16orf59Q7L2K0 433 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 DYMQ7RTS9 669 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 ZNF410Q86VK4 478 aa7.81□□□□□ -1.16
CHCHD3P1-201ENST00000425516 RHPN2Q8IUC4 686 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms