RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CTNND1O60716 968 aaKnown RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 ULK1O75385 1050 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 DDX58O95786 925 aaKnown RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 MT-CO1P00395 513 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 HRGP04196 525 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 CYP2C8P10632 490 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 IARSP41252 1262 aaKnown RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 KCNJ6P48051 423 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 USP14P54578 494 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 TNFAIP2Q03169 654 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 G3BP1Q13283 466 aaKnown RBP eCLIP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 KLF1Q13351 362 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 RTP5Q14D33 572 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 PSMD6Q15008 389 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 INF2Q27J81 1249 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 INAVAQ3KP66 663 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 TUBB8Q3ZCM7 444 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 CFAP100Q494V2 611 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 IFIT1BQ5T764 474 aaKnown RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 KIAA1614Q5VZ46 1190 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 E4F1Q66K89 784 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 BRAPQ7Z569 592 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 ZNF227Q86WZ6 799 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 BRSK2Q8IWQ3 736 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 LSMEM1Q8N8F7 131 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 SEC14L1Q92503 715 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 DPF3Q92784 378 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 FERMT2Q96AC1 680 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 ZBTB8AQ96BR9 441 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 DDX11Q96FC9 970 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 FAM193BQ96PV7 902 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 NELL2Q99435 816 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 MTFR1LQ9H019 292 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 CD248Q9HCU0 757 aa4.29□□□□□ -1.72
SF3B1-205ENST00000424674 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 PPARGC1AQ9UBK2 798 aaKnown RBP4.29□□□□□ -1.72
SF3B1-205ENST00000424674 A0A1W2PQU0 124 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 C22orf46C9J442 243 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 RASA4BC9J798 803 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 FZD9O00144 591 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 CHL1O00533 1208 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 MEFVO15553 781 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 RASA4O43374 803 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 OFD1O75665 1012 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 ARIH2O95376 493 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 C8BP07358 591 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 SNRPB2P08579 225 aaKnown RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 JMJD7P0C870 316 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 FGFR1P11362 822 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 IDEP14735 1019 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 AKAP5P24588 427 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 FPR2P25090 351 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 HOXD12P35452 270 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 KRT9P35527 623 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 KRT20P35900 424 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 SLC6A11P48066 632 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 SNX16P57768 344 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 ERVK-21P61565 698 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 RPL11P62913 178 aaKnown RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 GABREP78334 506 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 PLP2Q04941 152 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 KCNAB2Q13303 367 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 TERF2Q15554 542 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 NBPF8Q3BBV2 869 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 UBXN11Q5T124 520 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 ITPRIPL1Q6GPH6 555 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 HIBCHQ6NVY1 386 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 CYP26C1Q6V0L0 522 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 ETV3LQ6ZN32 361 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 TTLL7Q6ZT98 887 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 GALNT5Q7Z7M9 940 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 KIF18BQ86Y91 864 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 ERC1Q8IUD2 1116 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 MYCT1Q8N699 235 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 C7orf31Q8N865 590 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 C1orf162Q8NEQ5 155 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 SLC35G2Q8TBE7 412 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 NSUN6Q8TEA1 469 aaKnown RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 USP13Q92995 863 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 TRIM44Q96DX7 344 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 VMP1Q96GC9 406 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 TAAR9Q96RI9 348 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 ORAI3Q9BRQ5 295 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 MRPL9Q9BYD2 267 aaKnown RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 LMAN2LQ9H0V9 348 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 RSAD1Q9HA92 442 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 PCDH18Q9HCL0 1135 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 TOPORSQ9NS56 1045 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 NDOR1Q9UHB4 597 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 DNM3Q9UQ16 869 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 MAGED1Q9Y5V3 778 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-205ENST00000424674 SNX5Q9Y5X3 404 aa4.28□□□□□ -1.72
SF3B1-205ENST00000424674 KAT6BQ8WYB5 2073 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 RRN3P2A6NIE6 340 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 SGSM2O43147 1006 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 MYO1BO43795 1136 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 PRICKLE3O43900 615 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 PQBP1O60828 265 aaKnown RBP4.27□□□□□ -1.73
SF3B1-205ENST00000424674 GFPT2O94808 682 aa4.27□□□□□ -1.73
SF3B1-205ENST00000424674 CD4P01730 458 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms