RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HOXB7P09629 217 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 MAPK9P45984 424 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 AP2B1P63010 937 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 SMAD4Q13485 552 aaKnown RBP3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ANKRD1Q15327 319 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 TBCELQ5QJ74 424 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PRAMEF19Q5SWL8 479 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF280DQ6N043 979 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF365Q70YC5 407 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 FAM83AQ86UY5 434 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 VPS36Q86VN1 386 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PLEKHM2Q8IWE5 1019 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF713Q8N859 430 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PPP1R16BQ96T49 567 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 TINF2Q9BSI4 451 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ASCC2Q9H1I8 757 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PRDM16Q9HAZ2 1276 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 GPR108Q9NPR9 543 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 SPTLC3Q9NUV7 552 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PCDHB5Q9Y5E4 795 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ABCC4O15439 1325 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 UBN2Q6ZU65 1347 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ARID4AP29374 1257 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF165P49910 485 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF75DP51815 510 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 TSTA3Q13630 321 aaPredicted RBP3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ANKRD20A8PQ5CZ79 823 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 GPR153Q6NV75 609 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 OLFM4Q6UX06 510 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 CEP57L1Q8IYX8 460 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 TMCO5AQ8N6Q1 288 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 RSAD2Q8WXG1 361 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 USP7Q93009 1102 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 SLITRK1Q96PX8 696 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 IL12RB2Q99665 862 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PYM1Q9BRP8 204 aaKnown RBP3.85□□□□□ -1.79
TOP2A-201ENST00000423485 EDEM2Q9BV94 578 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 SEMA6BQ9H3T3 888 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 POLKQ9UBT6 870 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ODF2LQ9ULJ1 636 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 HBS1LQ9Y450 684 aaKnown RBP3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF292O60281 2723 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 NFATC1O95644 943 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 CFHP08603 1231 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 CCNYL3P0C7X3 344 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 SCG2P13521 617 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 CNR2P34972 360 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 USP8P40818 1118 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 BACE1P56817 501 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PRKAA1Q13131 559 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 SURF1Q15526 300 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 E2F4Q16254 413 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 FAM102BQ5T8I3 360 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 KRT79Q5XKE5 535 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 PRR7Q8TB68 274 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 MED15Q96RN5 788 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 ZBTB40Q9NUA8 1239 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 MYH7P12883 1935 aa3.85□□□□□ -1.79
TOP2A-201ENST00000423485 AXIN1O15169 862 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 PGK1P00558 417 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TIMP1P01033 207 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SLFN14P0C7P3 912 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 HNF1AP20823 631 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 ERVK-21P61565 698 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SF3B4Q15427 424 aaKnown RBP eCLIP3.84□□□□□ -1.794e-7■■■□□ 17
TOP2A-201ENST00000423485 SUSD4Q5VX71 490 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF248Q8NDW4 579 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 DCAF4Q8WV16 495 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 HEXIM2Q96MH2 286 aaKnown RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 RMDN3Q96TC7 470 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 FAM124BQ9H5Z6 455 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 CYP4F11Q9HBI6 524 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TLR9Q9NR96 1032 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 ATP8A2Q9NTI2 1148 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 UTP6Q9NYH9 597 aaKnown RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 RGS17Q9UGC6 210 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SORCS3Q9UPU3 1222 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 PRG3Q9Y2Y8 225 aaPredicted RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 FBN2P35556 2912 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TNS2Q63HR2 1409 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TIPRLO75663 272 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TOP1P11387 765 aaKnown RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 RASA1P20936 1047 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 OXCT1P55809 520 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SP2Q02086 613 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 MFSD10Q14728 455 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 EDRF1Q3B7T1 1238 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 VARS2Q5ST30 1063 aaKnown RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 MFSD4BQ5TF39 518 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 KIAA1211LQ6NV74 962 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 HSCBQ8IWL3 235 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 LRRC47Q8N1G4 583 aaKnown RBP3.84□□□□□ -1.79
TOP2A-201ENST00000423485 KIAA1524Q8TCG1 905 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 NXPE3Q969Y0 559 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 TRPV6Q9H1D0 765 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 SFXN1Q9H9B4 322 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 AGPAT4Q9NRZ5 378 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 ERAP1Q9NZ08 941 aa3.84□□□□□ -1.79
TOP2A-201ENST00000423485 COL14A1Q05707 1796 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms