RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 OFD1O75665 1012 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 NCLP19338 710 aaKnown RBP22.47■■□□□ 1.19
GTF3A-202ENST00000419181 UBE3AQ05086 875 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 COL19A1Q14993 1142 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 PPP2R5AQ15172 486 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 ZRSR1Q15695 479 aaKnown RBP22.47■■□□□ 1.19
GTF3A-202ENST00000419181 FAM187BQ17R55 369 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 TMEM119Q4V9L6 283 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 KCNT2Q6UVM3 1135 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 THNSL1Q8IYQ7 743 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 SMG8Q8ND04 991 aaKnown RBP22.47■■□□□ 1.19
GTF3A-202ENST00000419181 CNNM3Q8NE01 707 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 PRIMPOLQ96LW4 560 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 ZNF558Q96NG5 402 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 RUSC1Q9BVN2 902 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 C2orf40Q9H1Z8 148 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 FZD8Q9H461 694 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 POLD4Q9HCU8 107 aa22.47■■□□□ 1.19
GTF3A-202ENST00000419181 PRMT7Q9NVM4 692 aaPredicted RBP22.47■■□□□ 1.19
GTF3A-202ENST00000419181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.46■■□□□ 1.19
GTF3A-202ENST00000419181 A0A1B0GUA9 196 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 SLC26A4O43511 780 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 CSPG5O95196 566 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 PPM1AP35813 382 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 PBX3P40426 434 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 GRIN1Q05586 938 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 PTPAQ15257 358 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 NOMO2Q5JPE7 1267 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 RINT1Q6NUQ1 792 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 FAM173BQ6P4H8 233 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 C1orf186Q6ZWK4 172 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 CABP7Q86V35 215 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 DAW1Q8N136 415 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 DEPTORQ8TB45 409 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 CCDC113Q9H0I3 377 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 UBE2ZQ9H832 354 aaPredicted RBP22.46■■□□□ 1.19
GTF3A-202ENST00000419181 RSAD1Q9HA92 442 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 TBC1D13Q9NVG8 400 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 INPP5FQ9Y2H2 1132 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 IPPQ9Y573 584 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 CLIC4Q9Y696 253 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 CNTNAP2Q9UHC6 1331 aa22.46■■□□□ 1.19
GTF3A-202ENST00000419181 IRS1P35568 1242 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 LONP1P36776 959 aaKnown RBP22.45■■□□□ 1.18
GTF3A-202ENST00000419181 PLCB3Q01970 1234 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 ADAMTS19Q8TE59 1207 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 CDK5RAP3Q96JB5 506 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 IFT74Q96LB3 600 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 PLIN2Q99541 437 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 LZTS1Q9Y250 596 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 MYH15Q9Y2K3 1946 aa22.45■■□□□ 1.18
GTF3A-202ENST00000419181 HIP1RO75146 1068 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 KCNQ1P51787 676 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 MAPK7Q13164 816 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 MAPK6Q16659 721 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 SLC27A1Q6PCB7 646 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 SLC39A11Q8N1S5 342 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 SYT2Q8N9I0 419 aaPredicted RBP22.44■■□□□ 1.18
GTF3A-202ENST00000419181 KIFC3Q9BVG8 833 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 ZSCAN16Q9H4T2 348 aaPredicted RBP22.44■■□□□ 1.18
GTF3A-202ENST00000419181 UBN1Q9NPG3 1134 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 TLR9Q9NR96 1032 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 SPG21Q9NZD8 308 aa22.44■■□□□ 1.18
GTF3A-202ENST00000419181 NCOR1O75376 2440 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 TTLL13PA6NNM8 815 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 INPPL1O15357 1258 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 PRKCBP05771 671 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 ITGA4P13612 1032 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 GUCY2CP25092 1073 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 UBA7P41226 1012 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 AFF1P51825 1210 aaKnown RBP22.43■■□□□ 1.18
GTF3A-202ENST00000419181 EFNA5P52803 228 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 SLC12A3P55017 1021 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 BCAR1P56945 870 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 HYAL1Q12794 435 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 CDR2LQ86X02 465 aaPredicted RBP22.43■■□□□ 1.18
GTF3A-202ENST00000419181 URGCPQ8TCY9 931 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 MRPS27Q92552 414 aaKnown RBP22.43■■□□□ 1.18
GTF3A-202ENST00000419181 PABPC5Q96DU9 382 aaKnown RBP22.43■■□□□ 1.18
GTF3A-202ENST00000419181 DRC1Q96MC2 740 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 TIPINQ9BVW5 301 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 TRIM6Q9C030 488 aaPredicted RBP22.43■■□□□ 1.18
GTF3A-202ENST00000419181 RNF39Q9H2S5 420 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 HES2Q9Y543 173 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 MYH11P35749 1972 aa22.43■■□□□ 1.18
GTF3A-202ENST00000419181 ACKR2O00590 384 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 NCK2O43639 380 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 ZC3H11AO75152 810 aaKnown RBP eCLIP22.42■■□□□ 1.18
GTF3A-202ENST00000419181 EDN1P05305 212 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 SSBP05455 408 aaKnown RBP eCLIP22.42■■□□□ 1.18
GTF3A-202ENST00000419181 PLA2G4BP0C869 781 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 BMP1P13497 986 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 ALDH7A1P49419 539 aaKnown RBP22.42■■□□□ 1.18
GTF3A-202ENST00000419181 PRPF4BQ13523 1007 aaKnown RBP22.42■■□□□ 1.18
GTF3A-202ENST00000419181 LRRC15Q8TF66 581 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 CALML4Q96GE6 196 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 UHRF1Q96T88 793 aaPredicted RBP22.42■■□□□ 1.18
GTF3A-202ENST00000419181 NXF3Q9H4D5 531 aaKnown RBP22.42■■□□□ 1.18
GTF3A-202ENST00000419181 NRDE2Q9H7Z3 1164 aa22.42■■□□□ 1.18
GTF3A-202ENST00000419181 KCND2Q9NZV8 630 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms