RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDR1-232ENST00000418800 TCEAL9Q9UHQ7 104 aa12.55□□□□□ -0.4
DDR1-232ENST00000418800 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
DDR1-232ENST00000418800 ALG6Q9Y672 507 aa12.55□□□□□ -0.4
DDR1-232ENST00000418800 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 MRC1P22897 1456 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 H0YGN5 161 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 DDX3XO00571 662 aaKnown RBP eCLIP12.54□□□□□ -0.45e-7■■■■■ 37.9
DDR1-232ENST00000418800 ARHGAP22Q7Z5H3 698 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 KRT35Q92764 455 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
DDR1-232ENST00000418800 SYT15Q9BQS2 421 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 USP40Q9NVE5 1235 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 NFS1Q9Y697 457 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.54□□□□□ -0.4
DDR1-232ENST00000418800 A0A0G2JND7 137 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 NVLO15381 856 aaKnown RBP12.54□□□□□ -0.4
DDR1-232ENST00000418800 CREB3O43889 395 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 SKIP12755 728 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 MRPS35P82673 323 aaKnown RBP12.54□□□□□ -0.4
DDR1-232ENST00000418800 GRIK5Q16478 980 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 CCNJLQ8IV13 435 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 ARHGEF26Q96DR7 871 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 TTC1Q99614 292 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 PAGR1Q9BTK6 254 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
DDR1-232ENST00000418800 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
DDR1-232ENST00000418800 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 CFAP69A5D8W1 941 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 ASAP2O43150 1006 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 SCNN1DP51172 638 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 ROR2Q01974 943 aaKnown RBP12.54□□□□□ -0.4
DDR1-232ENST00000418800 ITPK1Q13572 414 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 EPC2Q52LR7 807 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 SGO2Q562F6 1265 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 TRIM59Q8IWR1 403 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
DDR1-232ENST00000418800 EPAS1Q99814 870 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 CCDC77Q9BR77 488 aa12.54□□□□□ -0.4
DDR1-232ENST00000418800 GOLGA8IPA6NC78 632 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 GOLGA8JA6NMD2 632 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 CPA2P48052 419 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 ZNF268Q14587 947 aaPredicted RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 RCN1Q15293 331 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 HHATQ5VTY9 493 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 CWF19L1Q69YN2 538 aaKnown RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 C4orf33Q8N1A6 199 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 PROM2Q8N271 834 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 HIPK4Q8NE63 616 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 CFAP61Q8NHU2 1237 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 SLC30A5Q8TAD4 765 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 SCFD2Q8WU76 684 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 TMX4Q9H1E5 349 aaPredicted RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 CLDN3O15551 220 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 AHCYL1O43865 530 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 PCP11498 1178 aaKnown RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 RPL21P46778 160 aaKnown RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 PTDSS1P48651 473 aaKnown RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 INHBEP58166 350 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 ICA1Q05084 483 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 CETN1Q12798 172 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 TMED1Q13445 227 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 KNOP1Q1ED39 458 aaKnown RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 TRIM74Q86UV6 250 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 TRIM73Q86UV7 250 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 RBM46Q8TBY0 533 aaKnown RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 SMC6Q96SB8 1091 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 SLC12A4Q9UP95 1085 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 RASA4BC9J798 803 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 GOLGA8SH3BPF8 625 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 GOLGA8MH3BSY2 632 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 RASA4O43374 803 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 RASA1P20936 1047 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 RFC4P35249 363 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 GCLMP48507 274 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 MDH1BQ5I0G3 518 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDR1-232ENST00000418800 NT5DC3Q86UY8 548 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 ACTRT1Q8TDG2 376 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 ZNF317Q96PQ6 595 aaPredicted RBP12.53□□□□□ -0.4
DDR1-232ENST00000418800 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
DDR1-232ENST00000418800 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 GOLGA8RI6L899 631 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 ECEL1O95672 775 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 AGTP01019 485 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 DBN1Q16643 649 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 MFSD14BQ5SR56 506 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 ANO7Q6IWH7 933 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 SPOCK2Q92563 424 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 HAUS1Q96CS2 278 aa12.52□□□□□ -0.4
DDR1-232ENST00000418800 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
DDR1-232ENST00000418800 C5orf60A6NFR6 353 aa12.52□□□□□ -0.41
DDR1-232ENST00000418800 ATP9AO75110 1047 aa12.52□□□□□ -0.41
DDR1-232ENST00000418800 CFBP00751 764 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms