RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FBXO18Q8NFZ0 1043 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 RUBCNQ92622 972 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 LENG9Q96B70 501 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 ADAMTS10Q9H324 1103 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 ZNF302Q9NR11 478 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 WNT16Q9UBV4 365 aa20.14■□□□□ 0.81
VCP-202ENST00000417448 CHD6Q8TD26 2715 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 A0A0U1RQF3 1178 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 K7ELQ4 463 aaPredicted RBP20.13■□□□□ 0.81
VCP-202ENST00000417448 STK25O00506 426 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 ZC3H11AO75152 810 aaKnown RBP eCLIP20.13■□□□□ 0.81
VCP-202ENST00000417448 SP9P0CG40 484 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 ZSCAN20P17040 1043 aaPredicted RBP20.13■□□□□ 0.81
VCP-202ENST00000417448 CIITAP33076 1130 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 RSPO4Q2I0M5 234 aaPredicted RBP20.13■□□□□ 0.81
VCP-202ENST00000417448 FAM177A1Q8N128 213 aaPredicted RBP20.13■□□□□ 0.81
VCP-202ENST00000417448 SPRYD3Q8NCJ5 442 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 ZNF668Q96K58 619 aaPredicted RBP20.13■□□□□ 0.81
VCP-202ENST00000417448 TBC1D17Q9HA65 648 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 BRMS1Q9HCU9 246 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 DLGAP2Q9P1A6 1054 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 IGSF9Q9P2J2 1179 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 CA14Q9ULX7 337 aa20.13■□□□□ 0.81
VCP-202ENST00000417448 CACNA1GO43497 2377 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 SLC37A4O43826 429 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 DCNP07585 359 aaKnown RBP20.12■□□□□ 0.81
VCP-202ENST00000417448 FGFR4P22455 802 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 EIF4BP23588 611 aaKnown RBP20.12■□□□□ 0.81
VCP-202ENST00000417448 USP11P51784 963 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 POLGP54098 1239 aaPredicted RBP20.12■□□□□ 0.81
VCP-202ENST00000417448 BMS1Q14692 1282 aaKnown RBP20.12■□□□□ 0.81
VCP-202ENST00000417448 PTPN14Q15678 1187 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 SPECC1Q5M775 1068 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 SWSAP1Q6NVH7 229 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 TRMT1LQ7Z2T5 733 aaKnown RBP20.12■□□□□ 0.81
VCP-202ENST00000417448 DDX53Q86TM3 631 aaKnown RBP20.12■□□□□ 0.81
VCP-202ENST00000417448 LINC01465Q8N7H1 131 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 SUMF1Q8NBK3 374 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 TMEM87AQ8NBN3 555 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 IGSF21Q96ID5 467 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 ZNF577Q9BSK1 485 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 MRPL9Q9BYD2 267 aaKnown RBP20.12■□□□□ 0.81
VCP-202ENST00000417448 USP24Q9UPU5 2620 aa20.12■□□□□ 0.81
VCP-202ENST00000417448 MSH4O15457 936 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 DHX15O43143 795 aaKnown RBP20.11■□□□□ 0.81
VCP-202ENST00000417448 CLCN4P51793 760 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 GIT2Q14161 759 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 SAFBQ15424 915 aaKnown RBP eCLIP20.11■□□□□ 0.81
VCP-202ENST00000417448 NIPA1Q7RTP0 329 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 NEK8Q86SG6 692 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 BBXQ8WY36 941 aaPredicted RBP20.11■□□□□ 0.81
VCP-202ENST00000417448 SNX21Q969T3 373 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 AKT3Q9Y243 479 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
VCP-202ENST00000417448 MIA3Q5JRA6 1907 aa20.11■□□□□ 0.81
VCP-202ENST00000417448 COL4A3Q01955 1670 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 POTEMA6NI47 508 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 IPO5O00410 1097 aaKnown RBP20.1■□□□□ 0.81
VCP-202ENST00000417448 B4GALT3O60512 393 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 CCNT1O60563 726 aaKnown RBP20.1■□□□□ 0.81
VCP-202ENST00000417448 TBC1D8BQ0IIM8 1120 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 ZC3H14Q6PJT7 736 aaKnown RBP20.1■□□□□ 0.81
VCP-202ENST00000417448 POTEGQ6S5H5 508 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 LRRC71Q8N4P6 559 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 KLHL5Q96PQ7 755 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 NRDE2Q9H7Z3 1164 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 PATJQ8NI35 1801 aa20.1■□□□□ 0.81
VCP-202ENST00000417448 GALTP07902 379 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 GLULP15104 373 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 GNL2Q13823 731 aaKnown RBP20.09■□□□□ 0.81
VCP-202ENST00000417448 LARP1BQ659C4 914 aaKnown RBP20.09■□□□□ 0.81
VCP-202ENST00000417448 MIS18BP1Q6P0N0 1132 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 C15orf39Q6ZRI6 1047 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 PPFIBP1Q86W92 1011 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 HSCBQ8IWL3 235 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 CKAP2LQ8IYA6 745 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 SLC44A3Q8N4M1 653 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 LPPQ93052 612 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 TBC1D13Q9NVG8 400 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 DNAJB4Q9UDY4 337 aa20.09■□□□□ 0.81
VCP-202ENST00000417448 DDX25Q9UHL0 483 aaKnown RBP20.09■□□□□ 0.81
VCP-202ENST00000417448 MAFBQ9Y5Q3 323 aaPredicted RBP20.09■□□□□ 0.81
VCP-202ENST00000417448 CYP3A7-CYP3A51PA0A087WV96 503 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 SPDYE4A6NLX3 237 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 MEIS3P2A8K0S8 358 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 CSDE1O75534 798 aaKnown RBP20.08■□□□□ 0.81
VCP-202ENST00000417448 CNPP09543 421 aaKnown RBP20.08■□□□□ 0.81
VCP-202ENST00000417448 DARSP14868 501 aaKnown RBP20.08■□□□□ 0.81
VCP-202ENST00000417448 RFX1P22670 979 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 CYP3A7P24462 503 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 GPC3P51654 580 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 NBR1Q14596 966 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 LONRF3Q496Y0 759 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 Q4G0T1 1027 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 EFCAB12Q6NXP0 572 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 C1orf210Q8IVY1 113 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 MAML2Q8IZL2 1156 aaPredicted RBP20.08■□□□□ 0.81
VCP-202ENST00000417448 GPR152Q8TDT2 470 aa20.08■□□□□ 0.81
VCP-202ENST00000417448 MBOAT7Q96N66 472 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms