RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 ITGA4P13612 1032 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 HOXA11P31270 313 aaPredicted RBP12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 EFNA5P52803 228 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 SMTNP53814 917 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 MCM6Q14566 821 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 EP400NLQ6ZTU2 488 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 SYT2Q8N9I0 419 aaPredicted RBP12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 CCDC51Q96ER9 411 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 CASD1Q96PB1 797 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 FAM193BQ96PV7 902 aaPredicted RBP12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 ADPGKQ9BRR6 497 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 MRPL9Q9BYD2 267 aaKnown RBP12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 NFKBIZQ9BYH8 718 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 PANK2Q9BZ23 570 aa12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 RC3H2Q9HBD1 1191 aaKnown RBP12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
TM9SF4-203ENST00000417389 ARF4P18085 180 aaPredicted RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 LAG3P18627 525 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CA8P35219 290 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 STAT6P42226 847 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 NPTX2P47972 431 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 ME1P48163 572 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 NASPP49321 788 aaPredicted RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 SLC12A3P55017 1021 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 STRN3Q13033 797 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 NOMO2Q5JPE7 1267 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CLLU1OSQ5K130 101 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CDCA2Q69YH5 1023 aaPredicted RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 SLC27A1Q6PCB7 646 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 C1orf186Q6ZWK4 172 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CRIPAKQ8N1N5 446 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 PDILTQ8N807 584 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 KLHL23Q8NBE8 558 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CNNM3Q8NE01 707 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 MICAL1Q8TDZ2 1067 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 RAD54LQ92698 747 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CLP1Q92989 425 aaKnown RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 PRIMPOLQ96LW4 560 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 ZNF558Q96NG5 402 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 EIF2AQ9BY44 585 aaKnown RBP12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CCSER1Q9C0I3 900 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 RSAD1Q9HA92 442 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 KCND2Q9NZV8 630 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 HCSTQ9UBK5 93 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 PARP2Q9UGN5 583 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 USP20Q9Y2K6 914 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 IPPQ9Y573 584 aa12.19□□□□□ -0.46
TM9SF4-203ENST00000417389 N4BP3O15049 544 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 GRM6O15303 877 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 SLC16A4O15374 487 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 LPXNO60711 386 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 ZNF623O75123 536 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 YEATS4O95619 227 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 PLS3P13797 630 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 ATF7P17544 494 aaPredicted RBP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 GUCY2CP25092 1073 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 PBX3P40426 434 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 MATR3P43243 847 aaKnown RBP eCLIP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 DNM1Q05193 864 aaKnown RBP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 AMHR2Q16671 573 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 UBXN11Q5T124 520 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 CCDC73Q6ZRK6 1079 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 USP49Q70CQ1 688 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 APBB1IPQ7Z5R6 666 aaPredicted RBP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 ZNF598Q86UK7 904 aaKnown RBP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 COLGALT1Q8NBJ5 622 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 MRPL38Q96DV4 380 aaKnown RBP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 BICD1Q96G01 975 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 TCHPQ9BT92 498 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 FZD8Q9H461 694 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 C17orf75Q9HAS0 396 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 UBN1Q9NPG3 1134 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 LMCD1Q9NZU5 365 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 KCNG1Q9UIX4 513 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 RBM19Q9Y4C8 960 aaKnown RBP12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 HES2Q9Y543 173 aa12.18□□□□□ -0.46
TM9SF4-203ENST00000417389 CNTNAP2Q9UHC6 1331 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 MEIS3P2A8K0S8 358 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 ACKR2O00590 384 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 PPP6R2O75170 966 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 POMCP01189 267 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 AKAP5P24588 427 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 DDIT3P35638 169 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 KRT17Q04695 432 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 TIGD5Q53EQ6 642 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 NAALADL2Q58DX5 795 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms