RNA–Protein interactions for RNA: ENST00000417345.2

CNTFR-203, Transcript of ciliary neurotrophic factor receptor, humanhuman

TSL 3

Gene CNTFR, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-203ENST00000417345 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
CNTFR-203ENST00000417345 PAGE5Q96GU1 130 aa15.19■□□□□ 0.02
CNTFR-203ENST00000417345 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
CNTFR-203ENST00000417345 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
CNTFR-203ENST00000417345 TMEM134Q9H6X4 195 aa15.19■□□□□ 0.02
CNTFR-203ENST00000417345 EXOC1Q9NV70 894 aa15.19■□□□□ 0.02
CNTFR-203ENST00000417345 ARHGAP28Q9P2N2 729 aa15.19■□□□□ 0.02
CNTFR-203ENST00000417345 CNTNAP2Q9UHC6 1331 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 ACKR2O00590 384 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 N4BP3O15049 544 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 SMC2O95347 1197 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 GCNT3O95395 438 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 MAPTP10636 758 aaKnown RBP15.18■□□□□ 0.02
CNTFR-203ENST00000417345 FAM187BQ17R55 369 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 CNNM4Q6P4Q7 775 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 UNC13DQ70J99 1090 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 NPAS4Q8IUM7 802 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 FMR1NBQ8N0W7 255 aaPredicted RBP15.18■□□□□ 0.02
CNTFR-203ENST00000417345 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 DNAJC19Q96DA6 116 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 TIGD1Q96MW7 591 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 NTPCRQ9BSD7 190 aaKnown RBP15.18■□□□□ 0.02
CNTFR-203ENST00000417345 OSBPL7Q9BZF2 842 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 BLZF1Q9H2G9 400 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 MINDY3Q9H8M7 445 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 OLFML3Q9NRN5 406 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 RGS18Q9NS28 235 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 EXOC7Q9UPT5 735 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 PCDHB7Q9Y5E2 793 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 PCDHB13Q9Y5F0 798 aa15.18■□□□□ 0.02
CNTFR-203ENST00000417345 ADGRA3Q8IWK6 1321 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.17■□□□□ 0.02
CNTFR-203ENST00000417345 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.17■□□□□ 0.02
CNTFR-203ENST00000417345 PVALEFA0A1B0GWK0 134 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 ENPP3O14638 875 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 HOXA2O43364 376 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
CNTFR-203ENST00000417345 MATR3P43243 847 aaKnown RBP eCLIP15.17■□□□□ 0.02
CNTFR-203ENST00000417345 SARSP49591 514 aaKnown RBP15.17■□□□□ 0.02
CNTFR-203ENST00000417345 COASYQ13057 564 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 POSTNQ15063 836 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 RAB30Q15771 203 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 SLC27A1Q6PCB7 646 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 GRAMD1CQ8IYS0 662 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 ABI1Q8IZP0 508 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 RNF169Q8NCN4 708 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 TMEM161BQ8NDZ6 487 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 PGBD4Q96DM1 585 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 TCHPQ9BT92 498 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 CCDC113Q9H0I3 377 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 FZD8Q9H461 694 aa15.17■□□□□ 0.02
CNTFR-203ENST00000417345 CXXC1Q9P0U4 656 aaPredicted RBP15.17■□□□□ 0.02
CNTFR-203ENST00000417345 DLL1O00548 723 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 HNRNPDLO14979 420 aaKnown RBP15.16■□□□□ 0.02
CNTFR-203ENST00000417345 TLL1O43897 1013 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 NR1I2O75469 434 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 UPP2O95045 317 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 ARF4P18085 180 aaPredicted RBP15.16■□□□□ 0.02
CNTFR-203ENST00000417345 LIG4P49917 911 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 DEFB103AP81534 67 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 CUL4BQ13620 913 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 FAM26FQ5R3K3 315 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 ATF7IP2Q5U623 682 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 RASIP1Q5U651 963 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNTFR-203ENST00000417345 HERC6Q8IVU3 1022 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 SYCP3Q8IZU3 236 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 VWCEQ96DN2 955 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 CPB2Q96IY4 423 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 YME1L1Q96TA2 773 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 PRO3102Q9H379 93 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 RMND1Q9NWS8 449 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 TMEM161AQ9NX61 479 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 TBC1D7Q9P0N9 293 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 MSRAQ9UJ68 235 aa15.16■□□□□ 0.02
CNTFR-203ENST00000417345 FRMD3A2A2Y4 597 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 B4GALT5O43286 388 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 KIF20AO95235 890 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 EOMESO95936 686 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 PTMSP20962 102 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 NMT1P30419 496 aaKnown RBP15.15■□□□□ 0.02
CNTFR-203ENST00000417345 PSMD2Q13200 908 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 DSC3Q14574 896 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 TCTN1Q2MV58 587 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 ZNF568Q3ZCX4 644 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 FAM117BQ6P1L5 589 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 ZPBP2Q6X784 338 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 ENGASEQ8NFI3 743 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 RSPH1Q8WYR4 309 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 ACCSQ96QU6 501 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 TRAIPQ9BWF2 469 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 GTPBP4Q9BZE4 634 aaKnown RBP15.15■□□□□ 0.02
CNTFR-203ENST00000417345 ST6GALNAC4Q9H4F1 302 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 ELAC1Q9H777 363 aaKnown RBP15.15■□□□□ 0.02
CNTFR-203ENST00000417345 TMEM206Q9H813 350 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 ANKFY1Q9P2R3 1169 aa15.15■□□□□ 0.02
CNTFR-203ENST00000417345 TBX20Q9UMR3 447 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms