RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PTPN5P54829 565 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 VCPP55072 806 aaKnown RBP16.56■□□□□ 0.24
RPS28-201ENST00000417088 SPIRE1Q08AE8 756 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 GIT2Q14161 759 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 RARS2Q5T160 578 aaKnown RBP16.56■□□□□ 0.24
RPS28-201ENST00000417088 NCAPH2Q6IBW4 605 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 KREMEN2Q8NCW0 462 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 RIPOR3Q96MK2 946 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 PHOX2BQ99453 314 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 NAP1L4Q99733 375 aaKnown RBP16.56■□□□□ 0.24
RPS28-201ENST00000417088 PRRX2Q99811 253 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 DZANK1Q9NVP4 752 aa16.56■□□□□ 0.24
RPS28-201ENST00000417088 FAM205CA6NFA0 338 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 ZBTB39O15060 712 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 MARCH6O60337 910 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 TCF15Q12870 199 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
RPS28-201ENST00000417088 EMC2Q15006 297 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 KIAA1841Q6NSI8 718 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 OTUD6AQ7L8S5 288 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 FERMT3Q86UX7 667 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 URGCPQ8TCY9 931 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 RSAD1Q9HA92 442 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 ORC3Q9UBD5 711 aaPredicted RBP16.55■□□□□ 0.24
RPS28-201ENST00000417088 MYO10Q9HD67 2058 aa16.55■□□□□ 0.24
RPS28-201ENST00000417088 CNTNAP2Q9UHC6 1331 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 ASAP2O43150 1006 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 GAS2O43903 313 aaKnown RBP16.54■□□□□ 0.24
RPS28-201ENST00000417088 PDGFBP01127 241 aaPredicted RBP16.54■□□□□ 0.24
RPS28-201ENST00000417088 AVPR2P30518 371 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 CYP4A11Q02928 519 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 NR5A1Q13285 461 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 XKR9Q5GH70 373 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 ATAT1Q5SQI0 421 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 RNF149Q8NC42 400 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 FEZF2Q8TBJ5 459 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 TCP11Q8WWU5 503 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 TMEM175Q9BSA9 504 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 KANSL3Q9P2N6 904 aa16.54■□□□□ 0.24
RPS28-201ENST00000417088 LILRB3O75022 631 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 SLITRK3O94933 977 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 BAG4O95429 457 aaKnown RBP16.53■□□□□ 0.24
RPS28-201ENST00000417088 BRD1O95696 1058 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 ALDH2P05091 517 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
RPS28-201ENST00000417088 NCLP19338 710 aaKnown RBP16.53■□□□□ 0.24
RPS28-201ENST00000417088 AK2P54819 239 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 PPFIBP1Q86W92 1011 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 TPH2Q8IWU9 490 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 SLFN12Q8IYM2 578 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 ZDHHC14Q8IZN3 488 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 SMG8Q8ND04 991 aaKnown RBP16.53■□□□□ 0.24
RPS28-201ENST00000417088 WASF1Q92558 559 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 TNFRSF25Q93038 417 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 KLHL5Q96PQ7 755 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 XPNPEP1Q9NQW7 623 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 STK39Q9UEW8 545 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 SORCS3Q9UPU3 1222 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 FAN1Q9Y2M0 1017 aa16.53■□□□□ 0.24
RPS28-201ENST00000417088 KMT2EQ8IZD2 1858 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 NRP1O14786 923 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 POMCP01189 267 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 SSBP05455 408 aaKnown RBP eCLIP16.52■□□□□ 0.24
RPS28-201ENST00000417088 CNPP09543 421 aaKnown RBP16.52■□□□□ 0.24
RPS28-201ENST00000417088 CLCN4P51793 760 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 MTMR3Q13615 1198 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 TMC5Q6UXY8 1006 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 CABP7Q86V35 215 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 UBALD2Q8IYN6 164 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 TDRD5Q8NAT2 981 aaKnown RBP16.52■□□□□ 0.24
RPS28-201ENST00000417088 FAM193BQ96PV7 902 aaPredicted RBP16.52■□□□□ 0.24
RPS28-201ENST00000417088 MTRQ99707 1265 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 HSD17B14Q9BPX1 270 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 EIF2AK1Q9BQI3 630 aaKnown RBP16.52■□□□□ 0.24
RPS28-201ENST00000417088 EMILIN2Q9BXX0 1053 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 EIF2AQ9BY44 585 aaKnown RBP16.52■□□□□ 0.24
RPS28-201ENST00000417088 SMOC2Q9H3U7 446 aa16.52■□□□□ 0.24
RPS28-201ENST00000417088 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
RPS28-201ENST00000417088 TSPAN1O60635 241 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 ERLIN2O94905 339 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 LYPLA2O95372 231 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 ASGR2P07307 311 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 ITGA4P13612 1032 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 KLRC2P26717 231 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 KRT2P35908 639 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 PTENP60484 403 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 MXD4Q14582 209 aaPredicted RBP16.51■□□□□ 0.23
RPS28-201ENST00000417088 ANKRD1Q15327 319 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 GPR149Q86SP6 731 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 CNNM3Q8NE01 707 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 SFXN1Q9H9B4 322 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 UBN1Q9NPG3 1134 aa16.51■□□□□ 0.23
RPS28-201ENST00000417088 LIMD1Q9UGP4 676 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms