RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 NENFQ9UMX5 172 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 EXOC7Q9UPT5 735 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 PGRMC1O00264 195 aaKnown RBP10.78□□□□□ -0.68
LINC00494-201ENST00000416742 PAK2Q13177 524 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 LEKR1Q6ZMV7 388 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 NT5DC3Q86UY8 548 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 RPUSD2Q8IZ73 545 aaKnown RBP10.78□□□□□ -0.68
LINC00494-201ENST00000416742 NSUN6Q8TEA1 469 aaKnown RBP10.78□□□□□ -0.68
LINC00494-201ENST00000416742 RFFLQ8WZ73 363 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 BICD1Q96G01 975 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 CTTNBP2NLQ9P2B4 639 aa10.78□□□□□ -0.68
LINC00494-201ENST00000416742 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
LINC00494-201ENST00000416742 NOC2LQ9Y3T9 749 aaKnown RBP10.78□□□□□ -0.68
LINC00494-201ENST00000416742 KIF13BQ9NQT8 1826 aa10.77□□□□□ -0.68
LINC00494-201ENST00000416742 A0A0A6YYK5 440 aaPredicted RBP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 ZNF862O60290 1169 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 TMEM253P0C7T8 217 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 FDX1P10109 184 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 ITGA4P13612 1032 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 DSG3P32926 999 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 SNRNP35Q16560 246 aaKnown RBP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 C1orf220Q5T0J3 134 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 BSNDQ8WZ55 320 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 POMGNT1Q8WZA1 660 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 FAM84AQ96KN4 292 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 GDF3Q9NR23 364 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 TOPORSQ9NS56 1045 aaPredicted RBP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 PNMA2Q9UL42 364 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 GOLGA6CA6NDK9 693 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 SGPL1O95470 568 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 FTLP02792 175 aaPredicted RBP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 GOLGA6DP0CG33 693 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 DLATP10515 647 aaKnown RBP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 TMEM132BQ14DG7 1078 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 ZSCAN26Q16670 478 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 DNAJC21Q5F1R6 531 aaKnown RBP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 DDX42Q86XP3 938 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 SAMD3Q8N6K7 520 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 TMEM161BQ8NDZ6 487 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 RUBCNQ92622 972 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 GOLGA6AQ9NYA3 693 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 PSD3Q9NYI0 1048 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 TMOD4Q9NZQ9 345 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 USP20Q9Y2K6 914 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 RGPD3A6NKT7 1758 aaPredicted RBP10.77□□□□□ -0.69
LINC00494-201ENST00000416742 RGPD4Q7Z3J3 1758 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 UTRNP46939 3433 aa10.77□□□□□ -0.69
LINC00494-201ENST00000416742 CYP26A1O43174 497 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 SART1O43290 800 aaKnown RBP10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ADSSP30520 456 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 NCKAP1LP55160 1127 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ZNF211Q13398 564 aaPredicted RBP10.76□□□□□ -0.69
LINC00494-201ENST00000416742 MTERF2Q49AM1 385 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 EPC2Q52LR7 807 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 CFAP58Q5T655 872 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 FMNL3Q8IVF7 1028 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 OLIG1Q8TAK6 271 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 CALCOCO1Q9P1Z2 691 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 SUCLA2Q9P2R7 463 aaPredicted RBP10.76□□□□□ -0.69
LINC00494-201ENST00000416742 RBBP6Q7Z6E9 1792 aaKnown RBP10.76□□□□□ -0.69
LINC00494-201ENST00000416742 PEX10O60683 326 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 CLSTN1O94985 981 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 KIF22Q14807 665 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 SLFN11Q7Z7L1 901 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 C12orf56Q8IXR9 622 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 TRPM4Q8TD43 1214 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ACTRT1Q8TDG2 376 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ATP6V0A1Q93050 837 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 GPRASP2Q96D09 838 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 TIPINQ9BVW5 301 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 STXBP5LQ9Y2K9 1186 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ANKRD62A6NC57 917 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 HNRNPDLO14979 420 aaKnown RBP10.76□□□□□ -0.69
LINC00494-201ENST00000416742 FGGP02679 453 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 PSAPP07602 524 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ACTN2P35609 894 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 FAM76AQ8TAV0 307 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 SCFD2Q8WU76 684 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 SEMA4DQ92854 862 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 A1CFQ9NQ94 594 aaKnown RBP10.76□□□□□ -0.69
LINC00494-201ENST00000416742 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 AMACRQ9UHK6 382 aa10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ZNF214Q9UL59 606 aaPredicted RBP10.76□□□□□ -0.69
LINC00494-201ENST00000416742 ZNF541Q9H0D2 1346 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 OPA1O60313 960 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 DLK2Q6UY11 383 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 CCDC60Q8IWA6 550 aaPredicted RBP10.75□□□□□ -0.69
LINC00494-201ENST00000416742 ZIM3Q96PE6 472 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 SYT11Q9BT88 431 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
LINC00494-201ENST00000416742 GGA3Q9NZ52 723 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 P4HA2O15460 535 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 RGS20O76081 388 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 KCNA2P16389 499 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 RFX1P22670 979 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 ACTR2P61160 394 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 ERVK-9P63128 1117 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 KCTD16Q68DU8 428 aa10.75□□□□□ -0.69
LINC00494-201ENST00000416742 KRT39Q6A163 491 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms