RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZP2Q05996 745 aa27.75■■■□□ 2.03
HLA-C-204ENST00000415537 COASYQ13057 564 aa27.75■■■□□ 2.03
HLA-C-204ENST00000415537 CAPSQ13938 189 aa27.75■■■□□ 2.03
HLA-C-204ENST00000415537 NOTUMQ6P988 496 aa27.75■■■□□ 2.03
HLA-C-204ENST00000415537 MRPL10Q7Z7H8 261 aaKnown RBP27.75■■■□□ 2.03
HLA-C-204ENST00000415537 CNNM3Q8NE01 707 aa27.75■■■□□ 2.03
HLA-C-204ENST00000415537 KHSRPQ92945 711 aaKnown RBP eCLIP27.75■■■□□ 2.03
HLA-C-204ENST00000415537 POP1Q99575 1024 aaKnown RBP27.75■■■□□ 2.03
HLA-C-204ENST00000415537 POLR3FQ9H1D9 316 aaPredicted RBP27.75■■■□□ 2.03
HLA-C-204ENST00000415537 RSAD1Q9HA92 442 aa27.75■■■□□ 2.03
HLA-C-204ENST00000415537 DBR1Q9UK59 544 aaKnown RBP27.75■■■□□ 2.03
HLA-C-204ENST00000415537 CNTNAP2Q9UHC6 1331 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 EYA4O95677 639 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 U2AF2P26368 475 aaKnown RBP eCLIP27.74■■■□□ 2.03
HLA-C-204ENST00000415537 RPA1P27694 616 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 CA8P35219 290 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 SMC1AQ14683 1233 aaKnown RBP27.74■■■□□ 2.03
HLA-C-204ENST00000415537 HAUS3Q68CZ6 603 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 AGMOQ6ZNB7 445 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 MAEAQ7L5Y9 396 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 IFNLR1Q8IU57 520 aaPredicted RBP27.74■■■□□ 2.03
HLA-C-204ENST00000415537 FAM193BQ96PV7 902 aaPredicted RBP27.74■■■□□ 2.03
HLA-C-204ENST00000415537 GBP3Q9H0R5 595 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 NRDE2Q9H7Z3 1164 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 KANSL3Q9P2N6 904 aa27.74■■■□□ 2.03
HLA-C-204ENST00000415537 HIDE1A8MVS5 230 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 PI4K2BG5E9Z4 385 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 TSPAN1O60635 241 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 COL9A1P20849 921 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 GLRA2P23416 452 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 UBXN11Q5T124 520 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 SMRP1Q8NCR6 262 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 MCPH1Q8NEM0 835 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 CCDC51Q96ER9 411 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 CPB2Q96IY4 423 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 NFKBIZQ9BYH8 718 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 UBN1Q9NPG3 1134 aa27.73■■■□□ 2.03
HLA-C-204ENST00000415537 ITGA4P13612 1032 aa27.72■■■□□ 2.03
HLA-C-204ENST00000415537 NCLP19338 710 aaKnown RBP27.72■■■□□ 2.03
HLA-C-204ENST00000415537 MBTD1Q05BQ5 628 aa27.72■■■□□ 2.03
HLA-C-204ENST00000415537 POTEGQ6S5H5 508 aa27.72■■■□□ 2.03
HLA-C-204ENST00000415537 GALTP07902 379 aa27.71■■■□□ 2.03
HLA-C-204ENST00000415537 ALADP13716 330 aa27.71■■■□□ 2.03
HLA-C-204ENST00000415537 MUTP22033 750 aa27.71■■■□□ 2.03
HLA-C-204ENST00000415537 RBM10P98175 930 aaKnown RBP27.71■■■□□ 2.03
HLA-C-204ENST00000415537 NBR1Q14596 966 aa27.71■■■□□ 2.03
HLA-C-204ENST00000415537 TMEM87AQ8NBN3 555 aa27.71■■■□□ 2.03
HLA-C-204ENST00000415537 IGSF21Q96ID5 467 aa27.71■■■□□ 2.03
HLA-C-204ENST00000415537 TRIM6Q9C030 488 aaPredicted RBP27.71■■■□□ 2.03
HLA-C-204ENST00000415537 CSRNP2Q9H175 543 aa27.71■■■□□ 2.03
HLA-C-204ENST00000415537 ARHGEF35A5YM69 484 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 LRRIQ4A6NIV6 560 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 C19orf67A6NJJ6 358 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 FXR2P51116 673 aaKnown RBP eCLIP27.7■■■□□ 2.02
HLA-C-204ENST00000415537 TMEM31Q5JXX7 168 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 MCTP1Q6DN14 999 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 LLGL2Q6P1M3 1020 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 VPS52Q8N1B4 723 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 MRPL43Q8N983 215 aaKnown RBP27.7■■■□□ 2.02
HLA-C-204ENST00000415537 VN1R2Q8NFZ6 395 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 TMX3Q96JJ7 454 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 EIF2AQ9BY44 585 aaKnown RBP27.7■■■□□ 2.02
HLA-C-204ENST00000415537 RAB34Q9BZG1 259 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 GPRC5CQ9NQ84 441 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 DNAJB4Q9UDY4 337 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 LRWD1Q9UFC0 647 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 IPPQ9Y573 584 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 STK24Q9Y6E0 443 aa27.7■■■□□ 2.02
HLA-C-204ENST00000415537 CXCL14O95715 111 aa27.69■■■□□ 2.02
HLA-C-204ENST00000415537 CCT6AP40227 531 aaKnown RBP27.69■■■□□ 2.02
HLA-C-204ENST00000415537 PTGDRQ13258 359 aa27.69■■■□□ 2.02
HLA-C-204ENST00000415537 TMEM184AQ6ZMB5 413 aa27.69■■■□□ 2.02
HLA-C-204ENST00000415537 DDX53Q86TM3 631 aaKnown RBP27.69■■■□□ 2.02
HLA-C-204ENST00000415537 ZNF280BQ86YH2 543 aa27.69■■■□□ 2.02
HLA-C-204ENST00000415537 HACE1Q8IYU2 909 aa27.69■■■□□ 2.02
HLA-C-204ENST00000415537 C4orf32Q8N8J7 132 aa27.69■■■□□ 2.02
HLA-C-204ENST00000415537 SMG8Q8ND04 991 aaKnown RBP27.69■■■□□ 2.02
HLA-C-204ENST00000415537 C2orf71A6NGG8 1288 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 POMCP01189 267 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 ALDH2P05091 517 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 ARF4P18085 180 aaPredicted RBP27.68■■■□□ 2.02
HLA-C-204ENST00000415537 SLC11A1P49279 550 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 PDIA5Q14554 519 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 PADI6Q6TGC4 694 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 TMEM173Q86WV6 379 aaPredicted RBP27.68■■■□□ 2.02
HLA-C-204ENST00000415537 ZBTB8OSQ8IWT0 167 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 USP15Q9Y4E8 981 aaPredicted RBP27.68■■■□□ 2.02
HLA-C-204ENST00000415537 PCDHB6Q9Y5E3 794 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 C5orf42Q9H799 3197 aa27.68■■■□□ 2.02
HLA-C-204ENST00000415537 TDRD15B5MCY1 1934 aaKnown RBP27.67■■■□□ 2.02
HLA-C-204ENST00000415537 MCM2P49736 904 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 TOB1P50616 345 aaPredicted RBP27.67■■■□□ 2.02
HLA-C-204ENST00000415537 KCNC3Q14003 757 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 GIT2Q14161 759 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 AMHR2Q16671 573 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 ANKRD54Q6NXT1 300 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 CASP10Q92851 521 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 TMEM175Q9BSA9 504 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 ZBP1Q9H171 429 aa27.67■■■□□ 2.02
HLA-C-204ENST00000415537 STK39Q9UEW8 545 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms