RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 DDX58O95786 925 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 MT-ND3P03897 115 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 S100A6P06703 90 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 PCP11498 1178 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 EIF4BP23588 611 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 YY1P25490 414 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 CHKAP35790 457 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 PHKA1P46020 1223 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 POLD2P49005 469 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 RRP1P56182 461 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 C21orf58P58505 322 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 POLR2FP61218 127 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 G3BP1Q13283 466 aaKnown RBP eCLIP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 MTMR1Q13613 665 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 RASGRF1Q13972 1273 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 SCARB2Q14108 478 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 SSPNQ14714 243 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 LRRC14Q15048 493 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 CCNG2Q16589 344 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 C15orf59Q2T9L4 293 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 TUBB8Q3ZCM7 444 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 SUPT20HL1Q3ZLR7 823 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 KRTCAP3Q53RY4 240 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 BNC2Q6ZN30 1099 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 GBP6Q6ZN66 633 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 DGLUCYQ7Z3D6 616 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 PPP1R42Q7Z4L9 355 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 ZBTB46Q86UZ6 589 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 IQCA1Q86XH1 822 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 EPHX4Q8IUS5 362 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 ZNF619Q8N2I2 560 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 AADATQ8N5Z0 425 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 GBP7Q8N8V2 638 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 ATP11CQ8NB49 1132 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 SPATA5Q8NB90 893 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 TRIM58Q8NG06 486 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 FBXO30Q8TB52 745 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 CCHCR1Q8TD31 782 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 PARD3BQ8TEW8 1205 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 CTNNBL1Q8WYA6 563 aaPredicted RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 HDAC2Q92769 488 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 NINJ1Q92982 152 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 CNDP1Q96KN2 507 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 ASB2Q96Q27 587 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 RMDN3Q96TC7 470 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 SMAD5Q99717 465 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 TNMDQ9H2S6 317 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 EPB41L4BQ9H329 900 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 NRDE2Q9H7Z3 1164 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 BRD9Q9H8M2 597 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 VPS37BQ9H9H4 285 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 SSU72Q9NP77 194 aaKnown RBP4.02□□□□□ -1.77
SF3B1-203ENST00000414174 PPP1R14DQ9NXH3 145 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 UBAP1Q9NZ09 502 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 IL1RAPL1Q9NZN1 696 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 HDAC6Q9UBN7 1215 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 ADAMTS1Q9UHI8 967 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 GGT7Q9UJ14 662 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 GPR52Q9Y2T5 361 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 SAMM50Q9Y512 469 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 AK5Q9Y6K8 562 aa4.02□□□□□ -1.77
SF3B1-203ENST00000414174 CGNL1Q0VF96 1302 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 PITPNM2Q9BZ72 1349 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 A0A087WZG4 1122 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 CYP2D7A0A087X1C5 515 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ARPC4-TTLL3A0A0A6YYG9 625 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 C17orf113A0A1B0GUU1 675 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 LRRC72A6NJI9 287 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 PMM2O15305 246 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RNF113AO15541 343 aaKnown RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 SLC7A4O43246 635 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ZBTB43O43298 467 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 STX6O43752 255 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 USO1O60763 962 aaKnown RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 DIAPH2O60879 1101 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 TSC22D2O75157 780 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 MAFO75444 373 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 LRIG2O94898 1065 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RHOXF2BP0C7M4 288 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 THEGLP0DJG4 465 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 TFE3P19532 575 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 PSMA4P25789 261 aaKnown RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 PBLDP30039 288 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ATP5DP30049 168 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 STAT1P42224 750 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 GRK6P43250 576 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 LIG3P49916 1009 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 CCT8P50990 548 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RIPK4P57078 832 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 TUBA1BP68363 451 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 HNRNPUQ00839 825 aaKnown RBP eCLIP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 ITIH3Q06033 890 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 GABPB1Q06547 395 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 NMIQ13287 307 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-203ENST00000414174 TCIRG1Q13488 830 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 NEDD9Q14511 834 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 NFIXQ14938 502 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 IQCB1Q15051 598 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 RCN1Q15293 331 aa4.01□□□□□ -1.77
SF3B1-203ENST00000414174 MAP3K11Q16584 847 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms