RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 HYIQ5T013 277 aa16.39■□□□□ 0.21
LIMS4-201ENST00000413601 CDCA2Q69YH5 1023 aaPredicted RBP16.39■□□□□ 0.21
LIMS4-201ENST00000413601 KCNT2Q6UVM3 1135 aa16.39■□□□□ 0.21
LIMS4-201ENST00000413601 GLB1LQ6UWU2 654 aa16.39■□□□□ 0.21
LIMS4-201ENST00000413601 CDR2LQ86X02 465 aaPredicted RBP16.39■□□□□ 0.21
LIMS4-201ENST00000413601 ZBTB8OSQ8IWT0 167 aa16.39■□□□□ 0.21
LIMS4-201ENST00000413601 SMG8Q8ND04 991 aaKnown RBP16.39■□□□□ 0.21
LIMS4-201ENST00000413601 CDK5RAP3Q96JB5 506 aa16.39■□□□□ 0.21
LIMS4-201ENST00000413601 ZNF558Q96NG5 402 aa16.39■□□□□ 0.21
LIMS4-201ENST00000413601 RUSC1Q9BVN2 902 aa16.39■□□□□ 0.21
LIMS4-201ENST00000413601 MRPL9Q9BYD2 267 aaKnown RBP16.39■□□□□ 0.21
LIMS4-201ENST00000413601 TRIP11Q15643 1979 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 LIG1P18858 919 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 NCLP19338 710 aaKnown RBP16.38■□□□□ 0.21
LIMS4-201ENST00000413601 IRS1P35568 1242 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 NAMPTP43490 491 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 KCNQ1P51787 676 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 PPP2R5AQ15172 486 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 CSPP1Q1MSJ5 1256 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 AAK1Q2M2I8 961 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 RINT1Q6NUQ1 792 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 C1orf186Q6ZWK4 172 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 CABP7Q86V35 215 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 DEPTORQ8TB45 409 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 KIFAP3Q92845 792 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 CCDC51Q96ER9 411 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 IFT74Q96LB3 600 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 AK8Q96MA6 479 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 CSRNP2Q9H175 543 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 FZD8Q9H461 694 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
LIMS4-201ENST00000413601 TBC1D13Q9NVG8 400 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 PRMT7Q9NVM4 692 aaPredicted RBP16.38■□□□□ 0.21
LIMS4-201ENST00000413601 HES2Q9Y543 173 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 IPPQ9Y573 584 aa16.38■□□□□ 0.21
LIMS4-201ENST00000413601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.37■□□□□ 0.21
LIMS4-201ENST00000413601 TTLL13PA6NNM8 815 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 HIP1RO75146 1068 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 SSBP05455 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
LIMS4-201ENST00000413601 ITGA4P13612 1032 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
LIMS4-201ENST00000413601 AFF1P51825 1210 aaKnown RBP16.37■□□□□ 0.21
LIMS4-201ENST00000413601 BCAR1P56945 870 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
LIMS4-201ENST00000413601 PTPAQ15257 358 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 TMEM119Q4V9L6 283 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 CNNM3Q8NE01 707 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 TRIM6Q9C030 488 aaPredicted RBP16.37■□□□□ 0.21
LIMS4-201ENST00000413601 RSAD1Q9HA92 442 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 SPG21Q9NZD8 308 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 USP20Q9Y2K6 914 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 PCDHGC5Q9Y5F6 944 aa16.37■□□□□ 0.21
LIMS4-201ENST00000413601 A0A1B0GUA9 196 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 NT5C1B-RDH14C9J2C7 533 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 ZC3H11AO75152 810 aaKnown RBP eCLIP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 NPTXRO95502 500 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 PRKCBP05771 671 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 LONP1P36776 959 aaKnown RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 UBA7P41226 1012 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 ALDH7A1P49419 539 aaKnown RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 ERVFC1P60507 584 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 PLCB3Q01970 1234 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 UBE3AQ05086 875 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 RNASELQ05823 741 aaKnown RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 RAD51AP2Q09MP3 1159 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 HYAL1Q12794 435 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 MAPK6Q16659 721 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 FAM187BQ17R55 369 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 SLC27A1Q6PCB7 646 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 EP400NLQ6ZTU2 488 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 ADGRD2Q7Z7M1 963 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 DAW1Q8N136 415 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 SYT2Q8N9I0 419 aaPredicted RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 URGCPQ8TCY9 931 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 MICAL1Q8TDZ2 1067 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 RSPH1Q8WYR4 309 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 SYMPKQ92797 1274 aaKnown RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 APOL6Q9BWW8 343 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 CCDC113Q9H0I3 377 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 GBP3Q9H0R5 595 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 NXF3Q9H4D5 531 aaKnown RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 ZSCAN16Q9H4T2 348 aaPredicted RBP16.36■□□□□ 0.21
LIMS4-201ENST00000413601 IGFLR1Q9H665 355 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 NRDE2Q9H7Z3 1164 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 TLR9Q9NR96 1032 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 CNTNAP2Q9UHC6 1331 aa16.36■□□□□ 0.21
LIMS4-201ENST00000413601 CCDC169A6NNP5 214 aa16.35■□□□□ 0.21
LIMS4-201ENST00000413601 SFI1A8K8P3 1242 aa16.35■□□□□ 0.21
LIMS4-201ENST00000413601 B4GALT3O60512 393 aa16.35■□□□□ 0.21
LIMS4-201ENST00000413601 EDN1P05305 212 aa16.35■□□□□ 0.21
LIMS4-201ENST00000413601 PLA2G4BP0C869 781 aa16.35■□□□□ 0.21
LIMS4-201ENST00000413601 BMP1P13497 986 aa16.35■□□□□ 0.21
LIMS4-201ENST00000413601 KCNA5P22460 613 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms