RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 LRRC71Q8N4P6 559 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 REPS2Q8NFH8 660 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ZBED2Q9BTP6 218 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 EDEM3Q9BZQ6 932 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 UBE2TQ9NPD8 197 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF214Q9UL59 606 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 SLITRK3O94933 977 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 NLRP11P59045 1033 aaKnown RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 FSCN1Q16658 493 aaKnown RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 TMEM119Q4V9L6 283 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 SEL1L2Q5TEA6 688 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ANKRD40Q6AI12 368 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF560Q96MR9 790 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 FAM107BQ9H098 131 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 TMX1Q9H3N1 280 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 STARD7Q9NQZ5 370 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 BTBD7Q9P203 1132 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 N4BP2Q86UW6 1770 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 CYP2C19P33261 490 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ADCYAP1R1P41586 468 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 BFSP1Q12934 665 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 RRP1BQ14684 758 aaKnown RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 NOTUMQ6P988 496 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 IFNL1Q8IU54 200 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 RUSC1Q9BVN2 902 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 HSPBP1Q9NZL4 362 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 IL18RAPO95256 599 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ATP1A3P13637 1013 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 GJC1P36383 396 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ATF7IP2Q5U623 682 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ELMSAN1Q6PJG2 1045 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 CCDC50Q8IVM0 306 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 TNFRSF25Q93038 417 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF668Q96K58 619 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 NACA2Q9H009 215 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 HAUS4Q9H6D7 363 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 OLFML3Q9NRN5 406 aa9.19□□□□□ -0.94
SYNE1-211ENST00000413186 EPN1Q9Y6I3 576 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-211ENST00000413186 GNRH1P01148 92 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 ITGB5P18084 799 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 GCLMP48507 274 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 GTF2A1P52655 376 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-211ENST00000413186 GIT2Q14161 759 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 RNF34Q969K3 372 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 SAAL1Q96ER3 474 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 TTC36A6NLP5 189 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 STAMBPO95630 424 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 CTSHP09668 335 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 INSRRP14616 1297 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 ZNF699Q32M78 642 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 RASAL2Q9UJF2 1139 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 TBX20Q9UMR3 447 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 A0A1W2PQC6 194 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 HUS1O60921 280 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 FLT3LGP49771 235 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 MYBPC2Q14324 1141 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 CCDC144BQ3MJ40 725 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 DCAF4L1Q3SXM0 396 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 C10orf76Q5T2E6 689 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 HOOK3Q86VS8 718 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 CCDC170Q8IYT3 715 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 FBXL13Q8NEE6 735 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 SPIRE2Q8WWL2 714 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 HAS1Q92839 578 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 MAK16Q9BXY0 300 aaKnown RBP9.18□□□□□ -0.94
SYNE1-211ENST00000413186 CEP72Q9P209 647 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 RBPJLQ9UBG7 517 aa9.18□□□□□ -0.94
SYNE1-211ENST00000413186 GPR182O15218 404 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 MYBP10242 640 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PSEN2P49810 448 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 APLP1P51693 650 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PLPPR4Q7Z2D5 763 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 THEM5Q8N1Q8 247 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 CLEC4DQ8WXI8 215 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PNMA5Q96PV4 448 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 INPP5FQ9Y2H2 1132 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 FAM237AA0A1B0GTK4 181 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 OPA1O60313 960 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 LGALS2P05162 132 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 MNAT1P51948 309 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 MFSD10Q14728 455 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 GRIK4Q16099 956 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 WHAMMP3Q1A5X7 153 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 CFAP58Q5T655 872 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 SRGAP1Q7Z6B7 1085 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 ETNPPLQ8TBG4 499 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 SLC38A7Q9NVC3 462 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 LIMA1Q9UHB6 759 aaKnown RBP9.17□□□□□ -0.94
SYNE1-211ENST00000413186 FRMPD4Q14CM0 1322 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 THAP12O43422 761 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 HMGCRP04035 888 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 SERPING1P05155 500 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 KCNJ6P48051 423 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PAK2Q13177 524 aa9.17□□□□□ -0.94
SYNE1-211ENST00000413186 PDE1CQ14123 709 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms