RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 LIMA1Q9UHB6 759 aaKnown RBP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 ODF2LQ9ULJ1 636 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 EPN1Q9Y6I3 576 aaPredicted RBP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 PATJQ8NI35 1801 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 PDZD2O15018 2839 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 A0A087WUV0 522 aaPredicted RBP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 UBOX5O94941 541 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 ANP32DO95626 131 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 MYCP01106 439 aaPredicted RBP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 CCT4P50991 539 aaKnown RBP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 BPIFB4P59827 614 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 TFF2Q03403 129 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 DMWDQ09019 674 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 PRKG1Q13976 671 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 C2CD6Q53TS8 623 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 NUGGCQ68CJ6 796 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 OR52E8Q6IFG1 317 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 LONP2Q86WA8 852 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 ELOA2Q8IYF1 753 aaPredicted RBP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 CEP57L1Q8IYX8 460 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 VGLL2Q8N8G2 317 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 PSD4Q8NDX1 1056 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 FBXO25Q8TCJ0 367 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 FAM136AQ96C01 138 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 EBF2Q9HAK2 575 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 COPRSQ9NQ92 184 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 AMACRQ9UHK6 382 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 YBX2Q9Y2T7 364 aaKnown RBP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.43□□□□□ -1.86
RGPD3-202ENST00000409886 MYO7BQ6PIF6 2116 aa3.43□□□□□ -1.86
RGPD3-202ENST00000409886 MOXD2PA6NHM9 499 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 LOC730098B7Z3J9 87 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 AXIN1O15169 862 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 BAIAP3O94812 1187 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 FSBPO95073 299 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MOCS3O95396 460 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TOP3BO95985 862 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 FOXN2P32314 431 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 KCNJ1P48048 391 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 XRCC4Q13426 336 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ADAM9Q13443 819 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 SMAD4Q13485 552 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PRAMEF18Q5VWM3 479 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MIS18BP1Q6P0N0 1132 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PDXDC2PQ6P474 469 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 LURAP1LQ8IV03 231 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 RPUSD2Q8IZ73 545 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ZNF473Q8WTR7 871 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 HAUS7Q99871 368 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MKNK1Q9BUB5 465 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 YIPF3Q9GZM5 350 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 DNAJC17Q9NVM6 304 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ADAM22Q9P0K1 906 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 LRWD1Q9UFC0 647 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ATP11BQ9Y2G3 1177 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 NOTCH3Q9UM47 2321 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 DDX3XO00571 662 aaKnown RBP eCLIP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 NDUFAB1O14561 156 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 FSCN2O14926 492 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 DDX3YO15523 660 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 RAD51CO43502 376 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 AKR1B10O60218 316 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 DIAPH2O60879 1101 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 NEBLO76041 1014 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 STK10O94804 968 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 IGFBP4P22692 258 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 SSTR3P32745 418 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TNNT3P45378 269 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 IFNAR2P48551 515 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MRPL12P52815 198 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PGGT1BP53609 377 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 EPHB4P54760 987 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ELF3P78545 371 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 SMAD2Q15796 467 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 CCDC152Q4G0S7 254 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PTCRAQ6ISU1 281 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 NAA16Q6N069 864 aaPredicted RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TMPRSS6Q8IU80 811 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 SLC44A5Q8NCS7 719 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ENOX1Q8TC92 643 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 WDR60Q8WVS4 1066 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 KRT35Q92764 455 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 CYFIP2Q96F07 1278 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 NAA15Q9BXJ9 866 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ANO10Q9NW15 660 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PNMA2Q9UL42 364 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 MYO6Q9UM54 1294 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PCDHGA4Q9Y5G9 962 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 DOCK9Q9BZ29 2069 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ITPR1Q14643 2758 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 B4DLN1 442 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TK2O00142 265 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ZBTB39O15060 712 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 TLR3O15455 904 aaKnown RBP3.42□□□□□ -1.86
RGPD3-202ENST00000409886 GPAA1O43292 621 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 PRC1O43663 620 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 ACTN1P12814 892 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 RASA1P20936 1047 aa3.42□□□□□ -1.86
RGPD3-202ENST00000409886 IGHMBP2P38935 993 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms