RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 ZNF214Q9UL59 606 aaPredicted RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 HPSEQ9Y251 543 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 SNHG28P0DPA3 235 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 FXR1P51114 621 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX13-202ENST00000409604 CCL23P55773 120 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 CLEC17AQ6ZS10 378 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 GPD1LQ8N335 351 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 UHMK1Q8TAS1 419 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 PACSIN2Q9UNF0 486 aaPredicted RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 KNL1Q8NG31 2342 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 MYO1EQ12965 1108 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 ALKBH5Q6P6C2 394 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 OTUD6BQ8N6M0 293 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 TIMM13Q9Y5L4 95 aaPredicted RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 MRPL42Q9Y6G3 142 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 BNIP3LO60238 219 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 N4BP1O75113 896 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 RGS7P49802 495 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 CPT1AP50416 773 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 FSCN1Q16658 493 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
SNX13-202ENST00000409604 DPF3Q92784 378 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 PLVAPQ9BX97 442 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 KBTBD4Q9NVX7 518 aa12.3□□□□□ -0.44
SNX13-202ENST00000409604 MYPNQ86TC9 1320 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 C17orf102A2RUQ5 167 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 USP27XA6NNY8 438 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 SCFD1Q8WVM8 642 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 HAUS1Q96CS2 278 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 SEMA6BQ9H3T3 888 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 LPXNO60711 386 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 GRAP2O75791 330 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 KIF11P52732 1056 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 KIAA0895Q8NCT3 520 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 POLR3CQ9BUI4 534 aaPredicted RBP12.29□□□□□ -0.44
SNX13-202ENST00000409604 NAA15Q9BXJ9 866 aaKnown RBP12.29□□□□□ -0.44
SNX13-202ENST00000409604 ACBD3Q9H3P7 528 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 AGPAT3Q9NRZ7 376 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 TBX20Q9UMR3 447 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 IGKV6D-41A0A0C4DH26 115 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 A8MXQ7 604 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 SLU7O95391 586 aaKnown RBP12.29□□□□□ -0.44
SNX13-202ENST00000409604 CCNE2O96020 404 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 OR1G1P47890 313 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 MMP14P50281 582 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 CBX1P83916 185 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 ZBED6P86452 979 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
SNX13-202ENST00000409604 GRIK4Q16099 956 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 IER5Q5VY09 327 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 DNERQ8NFT8 737 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 FAM107BQ9H098 131 aa12.29□□□□□ -0.44
SNX13-202ENST00000409604 MYO1FO00160 1098 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 LGALS2P05162 132 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 PRKCZQ05513 592 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 SNX1Q13596 522 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
SNX13-202ENST00000409604 DUOXA2Q1HG44 320 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 Q4G0T1 1027 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 SEL1L2Q5TEA6 688 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 KRT39Q6A163 491 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 MTMR9Q96QG7 549 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 INTS2Q9H0H0 1204 aaKnown RBP12.28□□□□□ -0.44
SNX13-202ENST00000409604 LRRC4Q9HBW1 653 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
SNX13-202ENST00000409604 MYH13Q9UKX3 1938 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 XPOTO43592 962 aaKnown RBP12.28□□□□□ -0.44
SNX13-202ENST00000409604 HUS1O60921 280 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 CALCAP01258 141 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 BTNL9Q6UXG8 535 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 REPS2Q8NFH8 660 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 HAUS4Q9H6D7 363 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 C10orf71Q711Q0 1435 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 AKAP3O75969 853 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 POMCP01189 267 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 ZNF200P98182 395 aaPredicted RBP12.28□□□□□ -0.44
SNX13-202ENST00000409604 LAMTOR4Q0VGL1 99 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 MAP2K5Q13163 448 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 KCNB1Q14721 858 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
SNX13-202ENST00000409604 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 FGFBP2Q9BYJ0 223 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 SEL1LQ9UBV2 794 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 FHOD1Q9Y613 1164 aa12.28□□□□□ -0.44
SNX13-202ENST00000409604 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.44
SNX13-202ENST00000409604 F5H423 210 aaPredicted RBP12.27□□□□□ -0.44
SNX13-202ENST00000409604 MFAP3LO75121 409 aa12.27□□□□□ -0.44
SNX13-202ENST00000409604 NDUFA10O95299 355 aa12.27□□□□□ -0.44
SNX13-202ENST00000409604 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms