RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 TPM3P06753 285 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
SHANK2-204ENST00000409530 UBXN1Q04323 297 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 ZBTB33Q86T24 672 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 KIAA0319LQ8IZA0 1049 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 CCDC155Q8N6L0 562 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 PDLIM2Q96JY6 352 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 ZBTB45Q96K62 511 aaPredicted RBP17.14■□□□□ 0.33
SHANK2-204ENST00000409530 ST6GALNAC4Q9H4F1 302 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 HSPBP1Q9NZL4 362 aa17.14■□□□□ 0.33
SHANK2-204ENST00000409530 TPM2P07951 284 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 CTSHP09668 335 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 EPB41P11171 864 aaKnown RBP17.13■□□□□ 0.33
SHANK2-204ENST00000409530 GOLGA8FQ08AF8 430 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 GOLGA8DPQ0D2H9 430 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 SEZ6Q53EL9 994 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 GDF6Q6KF10 455 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-204ENST00000409530 FAM186BQ8IYM0 893 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 CTAGE1Q96RT6 745 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 OSMRQ99650 979 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 RNF208Q9H0X6 261 aa17.13■□□□□ 0.33
SHANK2-204ENST00000409530 A0A1B0GTH6 734 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 H0YCG3 227 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 ADSSP30520 456 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 PHKA2P46019 1235 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 ACLYP53396 1101 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 MAPK6Q16659 721 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 LHX8Q68G74 356 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 LINC01465Q8N7H1 131 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 PCSK9Q8NBP7 692 aaKnown RBP17.12■□□□□ 0.33
SHANK2-204ENST00000409530 KLHDC9Q8NEP7 349 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 HSPA8P11142 646 aaKnown RBP17.12■□□□□ 0.33
SHANK2-204ENST00000409530 HVCN1Q96D96 273 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-204ENST00000409530 TCHPQ9BT92 498 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
SHANK2-204ENST00000409530 ARMCX3Q9UH62 379 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-204ENST00000409530 KPNA6O60684 536 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 TRIM49P0CI25 452 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 TRIM49CP0CI26 452 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
SHANK2-204ENST00000409530 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
SHANK2-204ENST00000409530 KLK7P49862 253 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 GPC3P51654 580 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 MBTD1Q05BQ5 628 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-204ENST00000409530 GOLGA5Q8TBA6 731 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 CPB2Q96IY4 423 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 PPP1R9BQ96SB3 815 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 CDHR5Q9HBB8 845 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
SHANK2-204ENST00000409530 GTF2IRD1Q9UHL9 959 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHANK2-204ENST00000409530 MSCO60682 206 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 CCL5P13501 91 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-204ENST00000409530 CBWD2Q8IUF1 395 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 ZNF830Q96NB3 372 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-204ENST00000409530 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 C2orf40Q9H1Z8 148 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 NOD1Q9Y239 953 aa17.11■□□□□ 0.33
SHANK2-204ENST00000409530 MBLAC1A4D2B0 266 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-204ENST00000409530 LGALS16A8MUM7 142 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
SHANK2-204ENST00000409530 EFNA5P52803 228 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 PTENP60484 403 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 PRPF4BQ13523 1007 aaKnown RBP17.1■□□□□ 0.33
SHANK2-204ENST00000409530 ARID5BQ14865 1188 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 NR1I3Q14994 352 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 MAN2A1Q16706 1144 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 XXYLT1Q8NBI6 393 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 CPLX3Q8WVH0 158 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 WNT8BQ93098 351 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 TRIM44Q96DX7 344 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-204ENST00000409530 FAM84AQ96KN4 292 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 TRMT13Q9NUP7 481 aaKnown RBP17.1■□□□□ 0.33
SHANK2-204ENST00000409530 GRIN2DO15399 1336 aa17.1■□□□□ 0.33
SHANK2-204ENST00000409530 A0A1W2PQ45 241 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-204ENST00000409530 A0A1W2PQY0 241 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 KBTBD13C9JR72 458 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ADRB2P07550 413 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 GNAT1P11488 350 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 CST5P28325 142 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ACOT2P49753 483 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 OSTNP61366 133 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ITGA7Q13683 1181 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 VWA3BQ502W6 1294 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ZBTB41Q5SVQ8 909 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ZC3H3Q8IXZ2 948 aaKnown RBP17.09■□□□□ 0.33
SHANK2-204ENST00000409530 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 CRACR2AQ9BSW2 395 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms