RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
RNF43-201ENST00000407977 CHN1P15882 459 aa13.76□□□□□ -0.21
RNF43-201ENST00000407977 CIITAP33076 1130 aa13.76□□□□□ -0.21
RNF43-201ENST00000407977 PRELPP51888 382 aa13.76□□□□□ -0.21
RNF43-201ENST00000407977 ROR1Q01973 937 aa13.76□□□□□ -0.21
RNF43-201ENST00000407977 SPICE1Q8N0Z3 855 aa13.76□□□□□ -0.21
RNF43-201ENST00000407977 SMAPO00193 183 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 ZBTB5O15062 677 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 KCNA3P22001 575 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 HIF1AQ16665 826 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 RIBC1Q8N443 379 aaPredicted RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 PALMDQ9NP74 551 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 TTC7AQ9ULT0 858 aaPredicted RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 MAGED2Q9UNF1 606 aaPredicted RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 UBE4BO95155 1302 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 PYGLP06737 847 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 SRGAP2CP0DJJ0 459 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 GCLMP48507 274 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 KRT17Q04695 432 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 HEATR6Q6AI08 1181 aaKnown RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 CCNYL1Q8N7R7 359 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 C11orf70Q9BRQ4 267 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 APOL6Q9BWW8 343 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 LY9Q9HBG7 655 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 CYP4F11Q9HBI6 524 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 PI4K2BG5E9Z4 385 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 TRIM66O15016 1216 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 MARK3P27448 753 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 TNFAIP2Q03169 654 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 MTHFD1LQ6UB35 978 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 IRAK4Q9NWZ3 460 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 UVRAGQ9P2Y5 699 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 ARHGEF5Q12774 1597 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 CCT8L1PA6NM43 557 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 E7ENQ6 273 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 AP3B1O00203 1094 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 SORBS3O60504 671 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 PHF2O75151 1096 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 TMCC1O94876 653 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 SRGNP10124 158 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 TYK2P29597 1187 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 SDC4P31431 198 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 ABCE1P61221 599 aaKnown RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 KIF22Q14807 665 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 TBC1D10CQ8IV04 446 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 MMGT1Q8N4V1 131 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
RNF43-201ENST00000407977 EML4Q9HC35 981 aaKnown RBP13.75□□□□□ -0.21
RNF43-201ENST00000407977 TBC1D22BQ9NU19 505 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 NDUFA13Q9P0J0 144 aa13.75□□□□□ -0.21
RNF43-201ENST00000407977 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 RAP1GDS1P52306 607 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 AP3M2P53677 418 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 PRKG1Q13976 671 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 CDO1Q16878 200 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 FRA10AC1Q70Z53 315 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 KIAA2013Q8IYS2 634 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 FAM167AQ96KS9 214 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 MTO1Q9Y2Z2 717 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 FAM47DPA6NHR8 397 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 SLC16A3O15427 465 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 KLHL2O95198 593 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 BCAR1P56945 870 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 SIK1P57059 783 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 MRPS15P82914 257 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 MECOMQ03112 1051 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 TXNRD1Q16881 649 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 ZBTB33Q86T24 672 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 LONP2Q86WA8 852 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 CYFIP2Q96F07 1278 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 ATP6V0A4Q9HBG4 840 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 PDP2Q9P2J9 529 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 SLC9A2Q9UBY0 812 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 UBN2Q6ZU65 1347 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 HNRNPRO43390 633 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 SLC26A4O43511 780 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 RTN2O75298 545 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 ANP32DO95626 131 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 KRT16P08779 473 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 ACADSP16219 412 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 CASP1P29466 404 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 DOK7Q18PE1 504 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 KIF17Q9P2E2 1029 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 USP17L3A6NCW0 530 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 USP17L4A6NCW7 530 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 POTEMA6NI47 508 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 TMEM270Q6UE05 265 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 SCARA5Q6ZMJ2 495 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 USP17L1Q7RTZ2 530 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 TSSK1BQ9BXA7 367 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 FSD1LQ9BXM9 530 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 CCSER1Q9C0I3 900 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 KIF9Q9HAQ2 790 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 DDX28Q9NUL7 540 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 ZNF229Q9UJW7 825 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms