RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 ZNF302Q9NR11 478 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 TBC1D22BQ9NU19 505 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 NOP53Q9NZM5 478 aaKnown RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 CITO14578 2027 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 ZBTB5O15062 677 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 SERPINB10P48595 397 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 KRT72Q14CN4 511 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 PCDHB6Q9Y5E3 794 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 ADGRL2O95490 1459 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 RNF103-CHMP3A0A140T963 221 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 CCDC195A0A1B0GUA6 201 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 MYBL1P10243 752 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 EFHC2Q5JST6 749 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 HIBCHQ6NVY1 386 aaPredicted RBP12.79□□□□□ -0.36
SMCR8-201ENST00000406438 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
SMCR8-201ENST00000406438 UBA6A0AVT1 1052 aaPredicted RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 DFFAO00273 331 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 CTIFO43310 598 aaKnown RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 NR3C1P04150 777 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 B4GALNT2Q8NHY0 566 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 PHF21AQ96BD5 680 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 MMP19Q99542 508 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 WNT8AQ9H1J5 351 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 GH2P01242 217 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 DYNLL2Q96FJ2 89 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 DCUN1D1Q96GG9 259 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 RUBCNLQ9H714 662 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 ZCCHC11Q5TAX3 1644 aaKnown RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 RALAP11233 206 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 PCYT1AP49585 367 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 VAMP7P51809 220 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 SNAP25P60880 206 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 PSMC1P62191 440 aaKnown RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 RAD51Q06609 339 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 RARS2Q5T160 578 aaKnown RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 FOPNLQ96NB1 174 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 TLR7Q9NYK1 1049 aaKnown RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 ADCY10Q96PN6 1610 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 SFNP31947 248 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 DDIASQ8IXT1 998 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 CASS4Q9NQ75 786 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 ABHD10Q9NUJ1 306 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 NBPF9Q3BBW0 867 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 MFSD14CQ5VZR4 134 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 DYDC2Q96IM9 177 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 AIPL1Q9NZN9 384 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
SMCR8-201ENST00000406438 GSNP06396 782 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 NEK2P51955 445 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 SKOR1P84550 965 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 SLC9A2Q9UBY0 812 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 DNAJC12Q9UKB3 198 aa12.78□□□□□ -0.36
SMCR8-201ENST00000406438 MAFGO15525 162 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 SDC4P31431 198 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 GRAPQ13588 217 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 THNSL1Q8IYQ7 743 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.36
SMCR8-201ENST00000406438 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 PARVAQ9NVD7 372 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 FAM83BQ5T0W9 1011 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 MASTLQ96GX5 879 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 ABCB11O95342 1321 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 MEI1Q5TIA1 1274 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.36
SMCR8-201ENST00000406438 ZFYVE19Q96K21 471 aa12.77□□□□□ -0.36
SMCR8-201ENST00000406438 AP3B1O00203 1094 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 PRKAB2O43741 272 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 ANO5Q75V66 913 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 PRDM5Q9NQX1 630 aaPredicted RBP12.77□□□□□ -0.37
SMCR8-201ENST00000406438 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 ZHX2Q9Y6X8 837 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 PJA2O43164 708 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 FCER1AP12319 257 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
SMCR8-201ENST00000406438 PTCH1Q13635 1447 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 CFAP69A5D8W1 941 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 TRIM60Q495X7 471 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.37
SMCR8-201ENST00000406438 ENOSF1Q7L5Y1 443 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 CCNYL1Q8N7R7 359 aa12.77□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
SMCR8-201ENST00000406438 TTC7AQ9ULT0 858 aaPredicted RBP12.77□□□□□ -0.37
SMCR8-201ENST00000406438 APOL1O14791 398 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 IL10P22301 178 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 PTPN21Q16825 1174 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 CATSPER3Q86XQ3 398 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SH3RF3Q8TEJ3 882 aaPredicted RBP12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SCFD1Q8WVM8 642 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SNF8Q96H20 258 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 M0QYV0 167 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SERPINI2O75830 405 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 GGPS1O95749 300 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 ALDH1A1P00352 501 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 MAPRE2Q15555 327 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 TAS2R42Q7RTR8 314 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms