RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 RASA3Q14644 834 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 CCDC142Q17RM4 750 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 DCAF17Q5H9S7 520 aaPredicted RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 SWT1Q5T5J6 900 aaKnown RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 C15orf39Q6ZRI6 1047 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 INTS8Q75QN2 995 aaKnown RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 FAM83AQ86UY5 434 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 NLRP14Q86W24 1093 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 DDX42Q86XP3 938 aaKnown RBP eCLIP4.18□□□□□ -1.746e-7■■□□□ 11.7
RTN4-209ENST00000405240 GLYCTKQ8IVS8 523 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 KLHL7Q8IXQ5 586 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 SLC17A8Q8NDX2 589 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 CHURC1Q8WUH1 139 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 PSPC1Q8WXF1 523 aaKnown RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 ART4Q93070 314 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 MFSD14AQ96MC6 490 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 CCT8L2Q96SF2 557 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 AP1M1Q9BXS5 423 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 DDX47Q9H0S4 455 aaKnown RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 EHMT1Q9H9B1 1298 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 ZNF70Q9UC06 446 aaPredicted RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 NEU2Q9Y3R4 380 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 PTPRFP10586 1907 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 DAPK3O43293 454 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 PHF2O75151 1096 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 P4HBP07237 508 aaKnown RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 MMP10P09238 476 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 GBP1P32455 592 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 GTF2H1P32780 548 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 MMP13P45452 471 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 GPC3P51654 580 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 GUCY1A3Q02108 690 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 RUFY4Q6ZNE9 571 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 DAAM2Q86T65 1068 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 TAX1BP1Q86VP1 789 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 KSR1Q8IVT5 923 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 TPH2Q8IWU9 490 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 FAM178BQ8IXR5 827 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 C4orf19Q8IY42 314 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 PRELID2Q8N945 189 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 SUPT20HQ8NEM7 779 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 HELQQ8TDG4 1101 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 SHC3Q92529 594 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 UIMC1Q96RL1 719 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 NAP1L3Q99457 506 aaPredicted RBP4.18□□□□□ -1.74
RTN4-209ENST00000405240 PSMD1Q99460 953 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 ZSWIM1Q9BR11 485 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 LXNQ9BS40 222 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 ZNF577Q9BSK1 485 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 WNT8AQ9H1J5 351 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 GINM1Q9NU53 330 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 AMACRQ9UHK6 382 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 FRMD4BQ9Y2L6 1034 aa4.18□□□□□ -1.74
RTN4-209ENST00000405240 EP400Q96L91 3159 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 IPO5O00410 1097 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 PPP1R12BO60237 982 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 GAS7O60861 476 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ADSSP30520 456 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 CHRNA3P32297 505 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RARRES1P49788 294 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 VAMP7P51809 220 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 PPP2R2AP63151 447 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 MRPS9P82933 396 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 ERMARDQ5T6L9 678 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 MFSD5Q6N075 450 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TTC27Q6P3X3 843 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RSBN1LQ6PCB5 846 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 KCNV1Q6PIU1 500 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RHBDF2Q6PJF5 856 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 PADI6Q6TGC4 694 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 LDHDQ86WU2 507 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ARFGAP2Q8N6H7 521 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TMC2Q8TDI7 906 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 SLC20A1Q8WUM9 679 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RNF25Q96BH1 459 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 KREMEN1Q96MU8 473 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RUNDC3BQ96NL0 473 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ZNF317Q96PQ6 595 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 ACCSQ96QU6 501 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 CSRNP1Q96S65 589 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RAB17Q9H0T7 212 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 LRRC19Q9H756 370 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 QTRT2Q9H974 415 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.17□□□□□ -1.74
RTN4-209ENST00000405240 A1CFQ9NQ94 594 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 ALG6Q9Y672 507 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ZHX2Q9Y6X8 837 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 SYNGAP1Q96PV0 1343 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 GMNCA6NCL1 334 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TCEA3O75764 348 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RASSF9O75901 435 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 FGGP02679 453 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 MYZAPP0CAP1 466 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 DRD4P21917 467 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RTP1P59025 263 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 GPC5P78333 572 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 FMO1Q01740 532 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ACTN3Q08043 901 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 PTP4A2Q12974 167 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 AOC3Q16853 763 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms