RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 NOMO2Q5JPE7 1267 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 CWF19L1Q69YN2 538 aaKnown RBP20.06■□□□□ 0.8
HDAC11-204ENST00000404040 TWF2Q6IBS0 349 aaKnown RBP20.06■□□□□ 0.8
HDAC11-204ENST00000404040 CABP7Q86V35 215 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 BLIDQ8IZY5 108 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 AIFM3Q96NN9 605 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 CEP89Q96ST8 783 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 VN1R3Q9BXE9 311 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 TEKT3Q9BXF9 490 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 NIFKQ9BYG3 293 aaKnown RBP20.06■□□□□ 0.8
HDAC11-204ENST00000404040 NRDE2Q9H7Z3 1164 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 SFXN1Q9H9B4 322 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 CYP26B1Q9NR63 512 aa20.06■□□□□ 0.8
HDAC11-204ENST00000404040 PIN4Q9Y237 131 aaKnown RBP20.06■□□□□ 0.8
HDAC11-204ENST00000404040 A0A087WZ62 844 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 IGKV6-21A0A0C4DH24 114 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 TMEM150BA6NC51 233 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 MEIS3P2A8K0S8 358 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 GALTP07902 379 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 SKIP12755 728 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 GJB2P29033 226 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 RAB27AP51159 221 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 CDC42EP1Q00587 391 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 MTERF2Q49AM1 385 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 TMC5Q6UXY8 1006 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 ZNF410Q86VK4 478 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 PPFIBP1Q86W92 1011 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 RDM1Q8NG50 284 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 GJA10Q969M2 543 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 FDXACB1Q9BRP7 624 aaPredicted RBP20.05■□□□□ 0.8
HDAC11-204ENST00000404040 FAM105AQ9NUU6 356 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 INPP5FQ9Y2H2 1132 aa20.05■□□□□ 0.8
HDAC11-204ENST00000404040 B4GALT3O60512 393 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 STBD1O95210 358 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 PDCP20941 246 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 RNASELQ05823 741 aaKnown RBP20.04■□□□□ 0.8
HDAC11-204ENST00000404040 LONRF3Q496Y0 759 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 XKR3Q5GH77 459 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 CCDC149Q6ZUS6 474 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 FRMD5Q7Z6J6 570 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 GPR149Q86SP6 731 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 DNAJB4Q9UDY4 337 aa20.04■□□□□ 0.8
HDAC11-204ENST00000404040 ZNF623O75123 536 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 OFD1O75665 1012 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 PSMD10O75832 226 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 PDIA4P13667 645 aaKnown RBP20.03■□□□□ 0.8
HDAC11-204ENST00000404040 KRT2P35908 639 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 SLC11A1P49279 550 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 DNM2P50570 870 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 USP11P51784 963 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 OTOP3Q7RTS5 596 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 MIER3Q7Z3K6 550 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 FLCNQ8NFG4 579 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 FBXO18Q8NFZ0 1043 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 NKD2Q969F2 451 aaPredicted RBP20.03■□□□□ 0.8
HDAC11-204ENST00000404040 ACSF2Q96CM8 615 aaPredicted RBP20.03■□□□□ 0.8
HDAC11-204ENST00000404040 INO80BQ9C086 356 aaPredicted RBP20.03■□□□□ 0.8
HDAC11-204ENST00000404040 KCNJ14Q9UNX9 436 aa20.03■□□□□ 0.8
HDAC11-204ENST00000404040 DOCK6Q96HP0 2047 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 AOC1P19801 751 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 CLCN4P51793 760 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 B3GNT9Q6UX72 402 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 KRT25Q7Z3Z0 450 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 RHPN2Q8IUC4 686 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 SH2D3AQ9BRG2 576 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 GBP3Q9H0R5 595 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 SUCLA2Q9P2R7 463 aaPredicted RBP20.02■□□□□ 0.8
HDAC11-204ENST00000404040 STK39Q9UEW8 545 aa20.02■□□□□ 0.8
HDAC11-204ENST00000404040 OTOGLQ3ZCN5 2332 aa20.02■□□□□ 0.79
HDAC11-204ENST00000404040 DMXL1Q9Y485 3027 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 CEP250Q9BV73 2442 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 SPDYE4A6NLX3 237 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 H3BQV1 296 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 NPR3P17342 541 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 TDGQ13569 410 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 Q4G0T1 1027 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 CATSPER4Q7RTX7 472 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 ZNF280BQ86YH2 543 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 CCDC105Q8IYK2 499 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 NLRP4Q96MN2 994 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 KLHL5Q96PQ7 755 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 EMILIN2Q9BXX0 1053 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 AGPAT5Q9NUQ2 364 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 DUSP12Q9UNI6 340 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 MIA3Q5JRA6 1907 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 MYH15Q9Y2K3 1946 aa20.01■□□□□ 0.79
HDAC11-204ENST00000404040 CCDC194A0A1B0GVG4 234 aa20■□□□□ 0.79
HDAC11-204ENST00000404040 MAFO75444 373 aaPredicted RBP20■□□□□ 0.79
HDAC11-204ENST00000404040 CNPP09543 421 aaKnown RBP20■□□□□ 0.79
HDAC11-204ENST00000404040 ANP32AP39687 249 aaKnown RBP20■□□□□ 0.79
HDAC11-204ENST00000404040 LARP1BQ659C4 914 aaKnown RBP20■□□□□ 0.79
HDAC11-204ENST00000404040 C15orf39Q6ZRI6 1047 aa20■□□□□ 0.79
HDAC11-204ENST00000404040 KSR1Q8IVT5 923 aa20■□□□□ 0.79
HDAC11-204ENST00000404040 URGCPQ8TCY9 931 aa20■□□□□ 0.79
HDAC11-204ENST00000404040 TBCKQ8TEA7 893 aa20■□□□□ 0.79
HDAC11-204ENST00000404040 PGBD4Q96DM1 585 aa20■□□□□ 0.79
HDAC11-204ENST00000404040 PCDHB2Q9Y5E7 798 aa20■□□□□ 0.79
HDAC11-204ENST00000404040 M0R2N6 131 aa19.99■□□□□ 0.79
HDAC11-204ENST00000404040 PI15O43692 258 aa19.99■□□□□ 0.79
HDAC11-204ENST00000404040 DTNBO60941 627 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms