RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GLB1L3Q8NCI6 653 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 LCORQ96JN0 433 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 SERPINB13Q9UIV8 391 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 TNIKQ9UKE5 1360 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 GRIN2AQ12879 1464 aa6.53□□□□□ -1.36
HMGB3P19-201ENST00000403971 E2F8A0AVK6 867 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 C2orf78A6NCI8 922 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 MROH6A6NGR9 719 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 IL33O95760 270 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 CT47B1P0C2W7 299 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 GAAP10253 952 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 NRG3P56975 720 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 KIF23Q02241 960 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 CCDC178Q5BJE1 867 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 CHPFQ8IZ52 775 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 HSPBAP1Q96EW2 488 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 OSBPL6Q9BZF3 934 aa6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 RBM8AQ9Y5S9 174 aaKnown RBP6.52□□□□□ -1.37
HMGB3P19-201ENST00000403971 A0A1W2PR48 441 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 NOBOXO60393 691 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 FSBPO95073 299 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 KCNC1P48547 511 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 MALLQ13021 153 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 ZNF827Q17R98 1081 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 NT5DC1Q5TFE4 455 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 AGBL4Q5VU57 503 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 BTNL9Q6UXG8 535 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 RALYLQ86SE5 291 aaKnown RBP6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 CLEC14AQ86T13 490 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 WDR75Q8IWA0 830 aaKnown RBP6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 KBTBD2Q8IY47 623 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 MSL3Q8N5Y2 521 aaKnown RBP6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 OR14K1Q8NGZ2 314 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 SSH1Q8WYL5 1049 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 FATE1Q969F0 183 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 TOX2Q96NM4 488 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 TCF7L1Q9HCS4 588 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 SCOCQ9UIL1 159 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 DNM3Q9UQ16 869 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 ANKRD6Q9Y2G4 727 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 GIT1Q9Y2X7 761 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 VWA7Q9Y334 891 aa6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 CTDP1Q9Y5B0 961 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P19-201ENST00000403971 B4GALT3O60512 393 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 TRIM13O60858 407 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 PPP3CAQ08209 521 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 TCIRG1Q13488 830 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 ANO4Q32M45 955 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 MUM1L1Q5H9M0 696 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 ZDHHC14Q8IZN3 488 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 THEMISQ8N1K5 641 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 NRG4Q8WWG1 115 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 RIN2Q8WYP3 895 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 DPF2Q92785 391 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 GFM2Q969S9 779 aaKnown RBP6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 UIMC1Q96RL1 719 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 OR10A2Q9H208 303 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 ING3Q9NXR8 418 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 ZBTB21Q9ULJ3 1066 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 NUP160Q12769 1436 aa6.5□□□□□ -1.37
HMGB3P19-201ENST00000403971 DBX1A6NMT0 343 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 DAPK3O43293 454 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 B4GALT4O60513 344 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 PRAMEF4O60810 478 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 RFPL1O75677 317 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 CTSSP25774 331 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 MCAMP43121 646 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 GJA9P57773 515 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 UBE3CQ15386 1083 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 MAN2A1Q16706 1144 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 RNF151Q2KHN1 245 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 UAP1L1Q3KQV9 507 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 USP30Q70CQ3 517 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 UNC5BQ8IZJ1 945 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 PLA2G15Q8NCC3 412 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 OR2I1PQ8NGU4 316 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 COA7Q96BR5 231 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 LRGUKQ96M69 825 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 CAMKK2Q96RR4 588 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 GREM2Q9H772 168 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 LIMCH1Q9UPQ0 1083 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 KIAA0586Q9BVV6 1533 aa6.49□□□□□ -1.37
HMGB3P19-201ENST00000403971 IQGAP2Q13576 1575 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 CEP170Q5SW79 1584 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 LTA4HP09960 611 aaKnown RBP6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 GSPT1P15170 499 aaKnown RBP6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 FXR1P51114 621 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 ADKP55263 362 aaKnown RBP6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 SESN2P58004 480 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 NOMO1Q15155 1222 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 ZMAT1Q5H9K5 638 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 FAM102BQ5T8I3 360 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 CATIPQ7Z7H3 387 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 C14orf80Q86SX3 495 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 MIER2Q8N344 545 aa6.48□□□□□ -1.37
HMGB3P19-201ENST00000403971 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms