RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ALG1Q9BT22 464 aa7.72□□□□□ -1.17
CSNK2A1-204ENST00000400227 EPB41L4AQ9HCS5 686 aaPredicted RBP7.72□□□□□ -1.17
CSNK2A1-204ENST00000400227 YBX2Q9Y2T7 364 aaKnown RBP7.72□□□□□ -1.17
CSNK2A1-204ENST00000400227 MROH7-TTC4A0A0A0MT08 1334 aa7.72□□□□□ -1.17
CSNK2A1-204ENST00000400227 RTL9Q8NET4 1388 aa7.72□□□□□ -1.17
CSNK2A1-204ENST00000400227 DLEC1Q9Y238 1755 aa7.72□□□□□ -1.17
CSNK2A1-204ENST00000400227 COL4A1P02462 1669 aa7.71□□□□□ -1.17
CSNK2A1-204ENST00000400227 AHDC1Q5TGY3 1603 aaPredicted RBP7.71□□□□□ -1.17
CSNK2A1-204ENST00000400227 STK36Q9NRP7 1315 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 CCDC85CA6NKD9 419 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 BECN2A8MW95 431 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 CTIFO43310 598 aaKnown RBP7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 PAX4O43316 350 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 RANBP6O60518 1105 aaKnown RBP7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 WDHD1O75717 1129 aaPredicted RBP7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 CDKL5O76039 1030 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 ZNF202O95125 648 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 PFKFB1P16118 471 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 HOXC12P31275 282 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 PPP2R2AP63151 447 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 CYP4F3Q08477 520 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 RASA3Q14644 834 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 GLIPR1L2Q4G1C9 344 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 SUSD4Q5VX71 490 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 KRT40Q6A162 431 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 SYNE3Q6ZMZ3 975 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 LRRC8AQ8IWT6 810 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 SPATA5Q8NB90 893 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 MKL1Q969V6 931 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 TIGD1Q96MW7 591 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 MAP3K14Q99558 947 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 SDF4Q9BRK5 362 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 NAT10Q9H0A0 1025 aaKnown RBP7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 INCENPQ9NQS7 918 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 KCND1Q9NSA2 647 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 HPSEQ9Y251 543 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 MYH2Q9UKX2 1941 aa7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 COL5A3P25940 1745 aaPredicted RBP7.71□□□□□ -1.18
CSNK2A1-204ENST00000400227 BCL9LQ86UU0 1499 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 PNPLA7Q6ZV29 1317 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 GOLGA8AA7E2F4 631 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 SMTNL1A8MU46 457 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 GSG1L2A8MUP6 293 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 EXOC5O00471 708 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 ZBTB43O43298 467 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 PPP6R2O75170 966 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 MBD4O95243 580 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 APPP05067 770 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 SCG5P05408 212 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 SLC3A2P08195 630 aaKnown RBP7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 PAMP19021 973 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 U2AF2P26368 475 aaKnown RBP eCLIP7.7□□□□□ -1.181e-8■■■□□ 17.2
CSNK2A1-204ENST00000400227 LIFRP42702 1097 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 CCZ1BP86790 482 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 CCZ1P86791 482 aaPredicted RBP7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 MAP3K12Q12852 859 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 CHAF1AQ13111 956 aaPredicted RBP7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 DPCR1Q3MIW9 517 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 CPLX2Q6PUV4 134 aaKnown RBP7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 JAMLQ86YT9 394 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 IFNL3Q8IZI9 196 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 MAGEB6Q8N7X4 407 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 ANKRD7Q92527 254 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 LIN37Q96GY3 246 aaPredicted RBP7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 CCDC140Q96MF4 163 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 OSBPL5Q9H0X9 879 aaPredicted RBP7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 CRTAC1Q9NQ79 661 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 GPRC5CQ9NQ84 441 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 FAM53CQ9NYF3 392 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 ACSL6Q9UKU0 697 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 TAF1P21675 1872 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 ROBO1Q9Y6N7 1651 aa7.7□□□□□ -1.18
CSNK2A1-204ENST00000400227 BAZ2AQ9UIF9 1905 aaKnown RBP7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 CACNA1SQ13698 1873 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 TRBV23OR9-2A0A075B6M9 112 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 CCDC69A6NI79 296 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 SNAP23O00161 211 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 CAMTA2O94983 1202 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 THBDP07204 575 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 TNNT1P13805 278 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 RXRAP19793 462 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 MARCKSP29966 332 aaPredicted RBP7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 IARSP41252 1262 aaKnown RBP7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 GALK1P51570 392 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 MTERF2Q49AM1 385 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 AKNAD1Q5T1N1 836 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 RESP18Q5W5W9 173 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 SHC4Q6S5L8 630 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 SPATC1Q76KD6 591 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 LRRC47Q8N1G4 583 aaKnown RBP7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 STAG1Q8WVM7 1258 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 PHKBQ93100 1093 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 DEPDC7Q96QD5 511 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 UTP14AQ9BVJ6 771 aaKnown RBP7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 KRT23Q9C075 422 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 SLC6A17Q9H1V8 727 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 ARMT1Q9H993 441 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 SNTG2Q9NY99 539 aa7.69□□□□□ -1.18
CSNK2A1-204ENST00000400227 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.69□□□□□ -1.185e-8■■■■□ 20.5
CSNK2A1-204ENST00000400227 IMPACTQ9P2X3 320 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms