RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 RAD17O75943 681 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 USP17L8P0C7I0 530 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 SIK1P57059 783 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 INPP5AQ14642 412 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF564Q8TBZ8 553 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 SLC13A1Q9BZW2 595 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 SYNDIG1Q9H7V2 258 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CAB39Q9Y376 341 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 PDCLQ13371 301 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CUL3Q13618 768 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 PKP1Q13835 747 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 DEPDC1Q5TB30 811 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 SNF8Q96H20 258 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 NFKBIL1Q9UBC1 381 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 DCTN4Q9UJW0 460 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 PCDHA6Q9UN73 950 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 PCDHB6Q9Y5E3 794 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 PCDHA8Q9Y5H6 950 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 NBPF9Q3BBW0 867 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ARL6IP4Q66PJ3 421 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ANKRD40Q6AI12 368 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 FAM180AQ6UWF9 173 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 DYNLL2Q96FJ2 89 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 TMEM161AQ9NX61 479 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 AIPL1Q9NZN9 384 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 IMPDH2P12268 514 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CAPZA2P47755 286 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ABCE1P61221 599 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 YIPF3Q9GZM5 350 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 C2orf40Q9H1Z8 148 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CYP4F11Q9HBI6 524 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 TTC7AQ9ULT0 858 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 TRAF3IP3Q9Y228 551 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CCDC22O60826 627 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 SUPT3HO75486 399 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 GPS1Q13098 491 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 UNC13DQ70J99 1090 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 MCPH1Q8NEM0 835 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 USP6NLQ92738 828 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 BHMT2Q9H2M3 363 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ADNPQ9H2P0 1102 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CDC25AP30304 524 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CDK8P49336 464 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 FAM213AQ9BRX8 229 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF302Q9NR11 478 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 PKD2L2Q9NZM6 624 aa13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-219ENST00000399649 CCDC78A2IDD5 438 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 GNA15P30679 374 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 ARL4DP49703 201 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 PDIA2Q13087 525 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF235Q14590 738 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 CCDC92Q53HC0 331 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 DDX53Q86TM3 631 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 PIGOQ8TEQ8 1089 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 OPTNQ96CV9 577 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 ADAMTS1Q9UHI8 967 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 MEFVO15553 781 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 GUCA1CO95843 209 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 SERPIND1P05546 499 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 ADORA2BP29275 332 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 HMOX2P30519 316 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 MAGOHP61326 146 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 PPP2R2AP63151 447 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 DALRD3Q5D0E6 543 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 PLD3Q8IV08 490 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 UBXN8O00124 270 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 APOL1O14791 398 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 PRKAB2O43741 272 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 DEAF1O75398 565 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 RMDN1Q96DB5 314 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF556Q9HAH1 456 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 FBXL5Q9UKA1 691 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 AURKCQ9UQB9 309 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 SHANK2Q9UPX8 1470 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 TBC1D4O60343 1298 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 SEC24DO94855 1032 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 C2orf69Q8N8R5 385 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 ARL8AQ96BM9 186 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 KRT14P02533 472 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 MEI1Q5TIA1 1274 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF507Q8TCN5 953 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 TLR7Q9NYK1 1049 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 MAP3K20Q9NYL2 800 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-219ENST00000399649 GRID2IPA4D2P6 1211 aa13.03□□□□□ -0.32
CACNA1C-219ENST00000399649 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-219ENST00000399649 TRADDQ15628 312 aa13.03□□□□□ -0.32
CACNA1C-219ENST00000399649 H2AFY2Q9P0M6 372 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms