RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 RAD51CO43502 376 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 XRCC5P13010 732 aaKnown RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 ZNF280AP59817 542 aaPredicted RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 ANKRD20A8PQ5CZ79 823 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 CCDC50Q8IVM0 306 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 C1orf131Q8NDD1 294 aaKnown RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 CLEC4DQ8WXI8 215 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 RANBP17Q9H2T7 1088 aaKnown RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 CEP72Q9P209 647 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 CHORDC1Q9UHD1 332 aaPredicted RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 CTNND1O60716 968 aaKnown RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 EYA4O95677 639 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 CYP2C8P10632 490 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 PON1P27169 355 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 HSPA9P38646 679 aaKnown RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 MTMR1Q13613 665 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 ASIC2Q16515 512 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 ASTE1Q2TB18 679 aaPredicted RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 ZNF571Q7Z3V5 609 aaPredicted RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 RNF10Q8N5U6 811 aaKnown RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 SYTL5Q8TDW5 730 aaPredicted RBP12.24□□□□□ -0.45
RCC1-204ENST00000398958 KLRG1Q96E93 195 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 SEC16BQ96JE7 1060 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 GCNT4Q9P109 453 aa12.24□□□□□ -0.45
RCC1-204ENST00000398958 GOLGA8IPA6NC78 632 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 GOLGA8JA6NMD2 632 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 USP2O75604 605 aaPredicted RBP12.23□□□□□ -0.45
RCC1-204ENST00000398958 GFPT2O94808 682 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 AFPP02771 609 aaKnown RBP12.23□□□□□ -0.45
RCC1-204ENST00000398958 UCHL3P15374 230 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 MARK3P27448 753 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 CIITAP33076 1130 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 HSD17B3P37058 310 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 CLNS1AP54105 237 aaKnown RBP12.23□□□□□ -0.45
RCC1-204ENST00000398958 EXOC3L4Q17RC7 722 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 GJC2Q5T442 439 aaPredicted RBP12.23□□□□□ -0.45
RCC1-204ENST00000398958 CYFIP1Q7L576 1253 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 SCYL3Q8IZE3 742 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 CACNA2D3Q8IZS8 1091 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 ANKRD35Q8N283 1001 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 GANQ9H2C0 597 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 PLCB1Q9NQ66 1216 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 CDH23Q9H251 3354 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 TRAPPC3O43617 180 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 ZBED4O75132 1171 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 ICAM1P05362 532 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 SCTRP47872 440 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 TNNC1P63316 161 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 SEMA3FQ13275 785 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 C1orf186Q6ZWK4 172 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 EPM2AIP1Q7L775 607 aaPredicted RBP12.23□□□□□ -0.45
RCC1-204ENST00000398958 MIER3Q7Z3K6 550 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 FAM178BQ8IXR5 827 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
RCC1-204ENST00000398958 TAF1DQ9H5J8 278 aaPredicted RBP12.23□□□□□ -0.45
RCC1-204ENST00000398958 SEPT11Q9NVA2 429 aaKnown RBP12.23□□□□□ -0.45
RCC1-204ENST00000398958 ZMYM2Q9UBW7 1377 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 CCDC189A1A4V9 331 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 CTNNA1P35221 906 aaKnown RBP12.22□□□□□ -0.45
RCC1-204ENST00000398958 DLG4P78352 724 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 PPP2R5AQ15172 486 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 SYCP3Q8IZU3 236 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 PPP1R9AQ9ULJ8 1098 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 GRID2IPA4D2P6 1211 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 TBX3O15119 743 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 HIP1RO75146 1068 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 NEBLO76041 1014 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 SERPING1P05155 500 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 RPSAP08865 295 aaKnown RBP12.22□□□□□ -0.45
RCC1-204ENST00000398958 PAX7P23759 505 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 CBWD6Q4V339 395 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 CBWD3Q5JTY5 395 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 CBWD5Q5RIA9 395 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 MOXD1Q6UVY6 613 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 LRIG3Q6UXM1 1119 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 SLC35C1Q96A29 364 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 TMOD4Q9NZQ9 345 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 SLC12A6Q9UHW9 1150 aa12.22□□□□□ -0.45
RCC1-204ENST00000398958 PIK3CDO00329 1044 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 CALUO43852 315 aaPredicted RBP12.21□□□□□ -0.45
RCC1-204ENST00000398958 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.45
RCC1-204ENST00000398958 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
RCC1-204ENST00000398958 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 KIRREL3Q8IZU9 778 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 GPC2Q8N158 579 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 UBLCP1Q8WVY7 318 aaPredicted RBP12.21□□□□□ -0.45
RCC1-204ENST00000398958 RAPGEF5Q92565 580 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 SLC5A5Q92911 643 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 INPP4AQ96PE3 977 aaPredicted RBP12.21□□□□□ -0.45
RCC1-204ENST00000398958 POLR3CQ9BUI4 534 aaPredicted RBP12.21□□□□□ -0.45
RCC1-204ENST00000398958 PARVGQ9HBI0 331 aa12.21□□□□□ -0.45
RCC1-204ENST00000398958 TYW1Q9NV66 732 aaKnown RBP12.21□□□□□ -0.45
RCC1-204ENST00000398958 ARHGEF35A5YM69 484 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 CCDC169A6NNP5 214 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms