RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 EEF1DP3Q658K8 133 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 ZBTB8OSQ8IWT0 167 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 SPIRE2Q8WWL2 714 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 LPPQ93052 612 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 TIFAQ96CG3 184 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 ZNF689Q96CS4 500 aaPredicted RBP17.4■□□□□ 0.38
MBD1-207ENST00000398488 ZBED2Q9BTP6 218 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 ZHX3Q9H4I2 956 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 C1orf112Q9NSG2 853 aa17.4■□□□□ 0.38
MBD1-207ENST00000398488 A0A0U1RQF3 1178 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 ERLIN2O94905 339 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 FAM13AO94988 1023 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 MAPTP10636 758 aaKnown RBP17.39■□□□□ 0.37
MBD1-207ENST00000398488 NMT1P30419 496 aaKnown RBP17.39■□□□□ 0.37
MBD1-207ENST00000398488 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 DMP1Q13316 513 aaPredicted RBP17.39■□□□□ 0.37
MBD1-207ENST00000398488 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.37
MBD1-207ENST00000398488 NPAS4Q8IUM7 802 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 MYCT1Q8N699 235 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 RAD9AQ99638 391 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 C2orf40Q9H1Z8 148 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 BLZF1Q9H2G9 400 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 C17orf75Q9HAS0 396 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 HCSTQ9UBK5 93 aa17.39■□□□□ 0.37
MBD1-207ENST00000398488 ACKR2O00590 384 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 AFMP43652 599 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 TAP1Q03518 808 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 SFR1Q86XK3 245 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 RNF169Q8NCN4 708 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 SMG8Q8ND04 991 aaKnown RBP17.38■□□□□ 0.37
MBD1-207ENST00000398488 SP7Q8TDD2 431 aaPredicted RBP17.38■□□□□ 0.37
MBD1-207ENST00000398488 HPS3Q969F9 1004 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 FAM161BQ96MY7 647 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 TRAIPQ9BWF2 469 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 TRIM9Q9C026 710 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 TNMDQ9H2S6 317 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 IKZF4Q9H2S9 585 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 PDZD7Q9H5P4 517 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 PARVGQ9HBI0 331 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 PRMT7Q9NVM4 692 aaPredicted RBP17.38■□□□□ 0.37
MBD1-207ENST00000398488 MSRAQ9UJ68 235 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 HES2Q9Y543 173 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 CDH23Q9H251 3354 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 CNTNAP2Q9UHC6 1331 aa17.38■□□□□ 0.37
MBD1-207ENST00000398488 A0A1B0GUA9 196 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 FRMD3A2A2Y4 597 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 LINC01553A4QN01 128 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 K7ERI5 159 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 LINC00271P0C7V0 271 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 AFF1P51825 1210 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 PRPF4BQ13523 1007 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 CUL4BQ13620 913 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 RAB30Q15771 203 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 MAPK6Q16659 721 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 ZC2HC1CQ53FD0 456 aaPredicted RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 CLLU1OSQ5K130 101 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 MRPS27Q92552 414 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 PAGE5Q96GU1 130 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 YME1L1Q96TA2 773 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 TARS2Q9BW92 718 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 CUEDC2Q9H467 287 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 TMEM134Q9H6X4 195 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 CERS4Q9HA82 394 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 TMEM161AQ9NX61 479 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 TBC1D7Q9P0N9 293 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 INSL6Q9Y581 213 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 PCDHB7Q9Y5E2 793 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 PCDHB2Q9Y5E7 798 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 EPOPA6NHQ4 379 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 TRAK2O60296 914 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 TBCAO75347 108 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 SLFN14P0C7P3 912 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 IDEP14735 1019 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 SYKP43405 635 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 EFNA5P52803 228 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 PAN2Q504Q3 1202 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 AGMOQ6ZNB7 445 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 HAUS6Q7Z4H7 955 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 GLIS3Q8NEA6 775 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 C7orf25Q9BPX7 421 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 SEMA6BQ9H3T3 888 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 ELAC1Q9H777 363 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 DACT1Q9NYF0 836 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
MBD1-207ENST00000398488 LRFN2Q9ULH4 789 aa17.37■□□□□ 0.37
MBD1-207ENST00000398488 PHLPP2Q6ZVD8 1323 aa17.36■□□□□ 0.37
MBD1-207ENST00000398488 ABLIM1O14639 778 aa17.36■□□□□ 0.37
MBD1-207ENST00000398488 ZNF623O75123 536 aa17.36■□□□□ 0.37
MBD1-207ENST00000398488 NPTXRO95502 500 aa17.36■□□□□ 0.37
MBD1-207ENST00000398488 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
MBD1-207ENST00000398488 AXLP30530 894 aa17.36■□□□□ 0.37
MBD1-207ENST00000398488 CASP5P51878 434 aa17.36■□□□□ 0.37
MBD1-207ENST00000398488 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
MBD1-207ENST00000398488 PCBP1Q15365 356 aaKnown RBP eCLIP17.36■□□□□ 0.37
MBD1-207ENST00000398488 NOTUMQ6P988 496 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms