RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FAM86B2P0C5J1 330 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 ABL2P42684 1182 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 CTCFP49711 727 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 SLC30A10Q6XR72 485 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 KSR1Q8IVT5 923 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 PAIP2Q9BPZ3 127 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 RGL1Q9NZL6 768 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 MYO3BQ8WXR4 1341 aa17.22■□□□□ 0.35
CHMP1A-201ENST00000397901 SLC16A3O15427 465 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 GNAT1P11488 350 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 ANXA13P27216 316 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 POU5F1Q01860 360 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 SF3A3Q12874 501 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 DOK7Q18PE1 504 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 ANKRD20A2Q5SQ80 823 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 ANKRD20A1Q5TYW2 823 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 ANKRD20A3Q5VUR7 823 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 ZFAND2BQ8WV99 257 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 SEC14L1Q92503 715 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 GLG1Q92896 1179 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 ERVK-5Q9HDB9 667 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 SAMD15Q9P1V8 674 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 INTUQ9ULD6 942 aa17.21■□□□□ 0.35
CHMP1A-201ENST00000397901 DDX3YO15523 660 aaKnown RBP17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 SLC26A4O43511 780 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 SMIM24O75264 130 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 MMP10P09238 476 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 NMT1P30419 496 aaKnown RBP17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 SOX5P35711 763 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 DRAP1Q14919 205 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 ZC2HC1CQ53FD0 456 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 FAM133BQ5BKY9 247 aaKnown RBP17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 CYP2W1Q8TAV3 490 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 LENG9Q96B70 501 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 ARHGEF26Q96DR7 871 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 GLT8D2Q9H1C3 349 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 PNMA2Q9UL42 364 aa17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.34
CHMP1A-201ENST00000397901 SPDYE3A6NKU9 549 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 TGFB1I1O43294 461 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 SHBGP04278 402 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 ATP2A2P16615 1042 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 NPEPPSP55786 919 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 DR1Q01658 176 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 NFIAQ12857 509 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 COG2Q14746 738 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 BMT2Q1RMZ1 405 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 SLC30A5Q8TAD4 765 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 CTNNBL1Q8WYA6 563 aaPredicted RBP17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 RFFLQ8WZ73 363 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 DNAJC12Q9UKB3 198 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 SMIM23A6NLE4 172 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 ABLIM1O14639 778 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 APBA3O96018 575 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 EEF2P13639 858 aaKnown RBP17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 LAMB3Q13751 1172 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 TAF11Q15544 211 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 SLFN13Q68D06 897 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 ERICH1Q86X53 443 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 ZFPM1Q8IX07 1006 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 GALNT15Q8N3T1 639 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 TLCD1Q96CP7 247 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 TAS2R14Q9NYV8 317 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 AGAP1Q9UPQ3 857 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
CHMP1A-201ENST00000397901 EML1O00423 815 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 PPFIA2O75334 1257 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 RBM5P52756 815 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 PTENP60484 403 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 KCNJ2P63252 427 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 AP3B2Q13367 1082 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 GNPTABQ3T906 1256 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 AADACL2Q6P093 401 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 MTHFD1LQ6UB35 978 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 PALB2Q86YC2 1186 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 CRYGNQ8WXF5 182 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 NAF1Q96HR8 494 aaKnown RBP17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 RAB17Q9H0T7 212 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 TMOD4Q9NZQ9 345 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 ZMYM2Q9UBW7 1377 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 NCANO14594 1321 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 LRRD1A4D1F6 860 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 MSH4O15457 936 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 HLA-DOAP06340 250 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 LMNB1P20700 586 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 ZNF131P52739 623 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 PLTPP55058 493 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 NCALDP61601 193 aa17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 CTTNQ14247 550 aaKnown RBP17.19■□□□□ 0.34
CHMP1A-201ENST00000397901 ARHGAP44Q17R89 818 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms