RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 NPEPPSP55786 919 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 COASYQ13057 564 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 PTPROQ16827 1216 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 HERC4Q5GLZ8 1057 aaPredicted RBP14.61□□□□□ -0.07
SEC13-209ENST00000397117 CT47A1Q5JQC4 288 aaPredicted RBP14.61□□□□□ -0.07
SEC13-209ENST00000397117 L1TD1Q5T7N2 865 aaKnown RBP14.61□□□□□ -0.07
SEC13-209ENST00000397117 SMYD4Q8IYR2 804 aaPredicted RBP14.61□□□□□ -0.07
SEC13-209ENST00000397117 TOP1MTQ969P6 601 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 BPIFA3Q9BQP9 254 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 GRPEL1Q9HAV7 217 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 CBX8Q9HC52 389 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 ODF2LQ9ULJ1 636 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 ATG2AQ2TAZ0 1938 aa14.61□□□□□ -0.07
SEC13-209ENST00000397117 COL4A6Q14031 1691 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 C17orf102A2RUQ5 167 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 GOLGA6L19H0YKK7 550 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 STBD1O95210 358 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 ALADP13716 330 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 GAP43P17677 238 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 SSTR3P32745 418 aaPredicted RBP14.6□□□□□ -0.07
SEC13-209ENST00000397117 MRE11P49959 708 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 SH2D3AQ9BRG2 576 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 TIPINQ9BVW5 301 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 CYP26B1Q9NR63 512 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 ERAP1Q9NZ08 941 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 GDAQ9Y2T3 454 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 LOXHD1Q8IVV2 1947 aa14.6□□□□□ -0.07
SEC13-209ENST00000397117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 FRMD3A2A2Y4 597 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 SMTNL1A8MU46 457 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 H3BRB1 525 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 TREHO43280 583 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 LGALS2P05162 132 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 SMIM10L2AP0DMW4 78 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 SMIM10L2BP0DMW5 78 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 ATP4AP20648 1035 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 MARK3P27448 753 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 PPP1R2P41236 205 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 GPM6BQ13491 265 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 MTERF2Q49AM1 385 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 TIGD5Q53EQ6 642 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 FAM26FQ5R3K3 315 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 KLHL10Q6JEL2 608 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 LUZP1Q86V48 1076 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 TRIM50Q86XT4 487 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 TMEM192Q8IY95 271 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 MYCT1Q8N699 235 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 BBXQ8WY36 941 aaPredicted RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 SEPT8Q92599 483 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 PABPC5Q96DU9 382 aaKnown RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 NIFKQ9BYG3 293 aaKnown RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 RNPEPQ9H4A4 650 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 TUT1Q9H6E5 874 aaKnown RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 PARVGQ9HBI0 331 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 SLC39A2Q9NP94 309 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 ZNF215Q9UL58 517 aaPredicted RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 TRPC6Q9Y210 931 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 PPP1R3GB7ZBB8 358 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 H3BQ06 376 aaPredicted RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 HIP1RO75146 1068 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 CAND2O75155 1236 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 DGAT1O75907 488 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 ERCC5P28715 1186 aaPredicted RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 POLGP54098 1239 aaPredicted RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 TPM4P67936 248 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 STK4Q13043 487 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 TCEAL5Q5H9L2 206 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 MAEAQ7L5Y9 396 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 ALYREFQ86V81 257 aaKnown RBP14.59□□□□□ -0.07
SEC13-209ENST00000397117 AOPEPQ8N6M6 819 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 ATP8B4Q8TF62 1192 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 HPS3Q969F9 1004 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 DRC1Q96MC2 740 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 TBC1D7Q9P0N9 293 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 MAPK8IP1Q9UQF2 711 aa14.59□□□□□ -0.07
SEC13-209ENST00000397117 C19orf67A6NJJ6 358 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 PSMA7O14818 248 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 KIF20AO95235 890 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
SEC13-209ENST00000397117 PRCPP42785 496 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 EHHADHQ08426 723 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 PLCB4Q15147 1175 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 UVSSAQ2YD98 709 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 FAM102BQ5T8I3 360 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 SFR1Q86XK3 245 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 DHX40Q8IX18 779 aaKnown RBP14.58□□□□□ -0.08
SEC13-209ENST00000397117 ADSSL1Q8N142 457 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 MCPH1Q8NEM0 835 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 YME1L1Q96TA2 773 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 ATP6V0A4Q9HBG4 840 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 POLD4Q9HCU8 107 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 SEL1LQ9UBV2 794 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 CTNND2Q9UQB3 1225 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 PPME1Q9Y570 386 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 MYH9P35579 1960 aaKnown RBP14.58□□□□□ -0.08
SEC13-209ENST00000397117 ZNF318Q5VUA4 2279 aa14.58□□□□□ -0.08
SEC13-209ENST00000397117 SFI1A8K8P3 1242 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 HBP1O60381 514 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 UPP2O95045 317 aa14.57□□□□□ -0.08
SEC13-209ENST00000397117 RFC5P40937 340 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms