RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 ZBTB39O15060 712 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 LILRB3O75022 631 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 P4HBP07237 508 aaKnown RBP14.85□□□□□ -0.03
RPA3-202ENST00000396682 SRGAP2CP0DJJ0 459 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 SPIRE1Q08AE8 756 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 LAMTOR4Q0VGL1 99 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 EARS2Q5JPH6 523 aaKnown RBP14.85□□□□□ -0.03
RPA3-202ENST00000396682 ATAT1Q5SQI0 421 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 TMC5Q6UXY8 1006 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 NEK8Q86SG6 692 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 ZDHHC14Q8IZN3 488 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 TDRD5Q8NAT2 981 aaKnown RBP14.85□□□□□ -0.03
RPA3-202ENST00000396682 PSPC1Q8WXF1 523 aaKnown RBP14.85□□□□□ -0.03
RPA3-202ENST00000396682 SLC7A3Q8WY07 619 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 PGBD4Q96DM1 585 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 LXNQ9BS40 222 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 RGL1Q9NZL6 768 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 C2orf16Q68DN1 1984 aa14.85□□□□□ -0.03
RPA3-202ENST00000396682 VPS13AQ96RL7 3174 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 CCDC194A0A1B0GVG4 234 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 CNPP09543 421 aaKnown RBP14.84□□□□□ -0.03
RPA3-202ENST00000396682 GCFC2P16383 781 aaKnown RBP14.84□□□□□ -0.03
RPA3-202ENST00000396682 YWHABP31946 246 aaKnown RBP14.84□□□□□ -0.03
RPA3-202ENST00000396682 RFC5P40937 340 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 CLCN4P51793 760 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 CPLX2Q6PUV4 134 aaKnown RBP14.84□□□□□ -0.03
RPA3-202ENST00000396682 PIK3AP1Q6ZUJ8 805 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 SRGAP1Q7Z6B7 1085 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 CABP7Q86V35 215 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 POTEDQ86YR6 584 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 C4orf19Q8IY42 314 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 TMEM105Q8N8V8 129 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 TMEM87AQ8NBN3 555 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 URGCPQ8TCY9 931 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 KLHL5Q96PQ7 755 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
RPA3-202ENST00000396682 RSAD1Q9HA92 442 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 PDRG1Q9NUG6 133 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 MARCH5Q9NX47 278 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 DBR1Q9UK59 544 aaKnown RBP14.84□□□□□ -0.03
RPA3-202ENST00000396682 USTQ9Y2C2 406 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 PPME1Q9Y570 386 aa14.84□□□□□ -0.03
RPA3-202ENST00000396682 FAM205CA6NFA0 338 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 H0Y858 1186 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 TBX3O15119 743 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 CCNT1O60563 726 aaKnown RBP14.83□□□□□ -0.04
RPA3-202ENST00000396682 DKC1O60832 514 aaKnown RBP eCLIP14.83□□□□□ -0.04
RPA3-202ENST00000396682 CTDNEP1O95476 244 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 POMCP01189 267 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 SSBP05455 408 aaKnown RBP eCLIP14.83□□□□□ -0.04
RPA3-202ENST00000396682 EMC2Q15006 297 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 EPHA7Q15375 998 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 GPR149Q86SP6 731 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 FERMT3Q86UX7 667 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 PPFIBP1Q86W92 1011 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 RNF149Q8NC42 400 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 SMG8Q8ND04 991 aaKnown RBP14.83□□□□□ -0.04
RPA3-202ENST00000396682 TMEM175Q9BSA9 504 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 SFXN1Q9H9B4 322 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 XPNPEP1Q9NQW7 623 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 TPCN1Q9ULQ1 816 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 STK36Q9NRP7 1315 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 CNTNAP2Q9UHC6 1331 aa14.83□□□□□ -0.04
RPA3-202ENST00000396682 NRP1O14786 923 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 GALR2O43603 387 aaPredicted RBP14.82□□□□□ -0.04
RPA3-202ENST00000396682 EFEMP2O95967 443 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 ALDH2P05091 517 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 NCLP19338 710 aaKnown RBP14.82□□□□□ -0.04
RPA3-202ENST00000396682 NUBP1P53384 320 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 CYP4A11Q02928 519 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 CTTNQ14247 550 aaKnown RBP14.82□□□□□ -0.04
RPA3-202ENST00000396682 NCAPH2Q6IBW4 605 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 TAS1R1Q7RTX1 841 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 EXOC8Q8IYI6 725 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 ATOH1Q92858 354 aaPredicted RBP14.82□□□□□ -0.04
RPA3-202ENST00000396682 DYDC2Q96IM9 177 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 EIF2AQ9BY44 585 aaKnown RBP14.82□□□□□ -0.04
RPA3-202ENST00000396682 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 KANSL3Q9P2N6 904 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 FAN1Q9Y2M0 1017 aa14.82□□□□□ -0.04
RPA3-202ENST00000396682 RIF1Q5UIP0 2472 aaKnown RBP14.81□□□□□ -0.04
RPA3-202ENST00000396682 F8W810 466 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 INPPL1O15357 1258 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 ST18O60284 1047 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 GFRA3O60609 400 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 TSPAN1O60635 241 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 PFKFB2O60825 505 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 CDKL5O76039 1030 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 KLRC2P26717 231 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 NR5A1Q13285 461 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 XKR9Q5GH70 373 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 COLGALT2Q8IYK4 626 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 RNF168Q8IYW5 571 aaPredicted RBP14.81□□□□□ -0.04
RPA3-202ENST00000396682 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 TCP11Q8WWU5 503 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 EMILIN2Q9BXX0 1053 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 ZSWIM4Q9H7M6 989 aa14.81□□□□□ -0.04
RPA3-202ENST00000396682 PRG3Q9Y2Y8 225 aaPredicted RBP14.81□□□□□ -0.04
RPA3-202ENST00000396682 HES2Q9Y543 173 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms