RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SOX10P56693 466 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 TNIP1Q15025 636 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 PNMA8AQ86V59 439 aaPredicted RBP10.05□□□□□ -0.8
NDE1-201ENST00000396354 DYDC1Q8WWB3 177 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 SLC35C1Q96A29 364 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 TEPSINQ96N21 525 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 PWWP2AQ96N64 755 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 SYT17Q9BSW7 474 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 GPRC5CQ9NQ84 441 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 GDF3Q9NR23 364 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 HAUS2Q9NVX0 235 aa10.05□□□□□ -0.8
NDE1-201ENST00000396354 TCRBV7S2A1N4TA0A589 114 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 FOXN3O00409 490 aaPredicted RBP10.04□□□□□ -0.8
NDE1-201ENST00000396354 CALUO43852 315 aaPredicted RBP10.04□□□□□ -0.8
NDE1-201ENST00000396354 PPP1R12BO60237 982 aaPredicted RBP10.04□□□□□ -0.8
NDE1-201ENST00000396354 SLITRK3O94933 977 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 CAP2P40123 477 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 CDR1P51861 262 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 PSMD2Q13200 908 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 HS2ST1Q7LGA3 356 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 OTOP1Q7RTM1 612 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 ZC3H3Q8IXZ2 948 aaKnown RBP10.04□□□□□ -0.8
NDE1-201ENST00000396354 SYT2Q8N9I0 419 aaPredicted RBP10.04□□□□□ -0.8
NDE1-201ENST00000396354 LNX1Q8TBB1 728 aaPredicted RBP10.04□□□□□ -0.8
NDE1-201ENST00000396354 SH3GL2Q99962 352 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 VCPKMTQ9H867 229 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 ASTN1O14525 1302 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 K7ENM7 598 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 SPOPO43791 374 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 PSMD10O75832 226 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 GUCY2CP25092 1073 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 NF2P35240 595 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 IFI35P80217 286 aaPredicted RBP10.04□□□□□ -0.8
NDE1-201ENST00000396354 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 PRUNE1Q86TP1 453 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 CCDC105Q8IYK2 499 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 FBXO25Q8TCJ0 367 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 SAAL1Q96ER3 474 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 CYFIP2Q96F07 1278 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 HSD17B14Q9BPX1 270 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.04□□□□□ -0.84e-7■■□□□ 12
NDE1-201ENST00000396354 EPN3Q9H201 632 aa10.04□□□□□ -0.8
NDE1-201ENST00000396354 PJA2O43164 708 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 CYP3A4P08684 503 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 DLATP10515 647 aaKnown RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 SETQ01105 290 aaPredicted RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 DR1Q01658 176 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 SPP2Q13103 211 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 PRAMEF18Q5VWM3 479 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 SLFN12Q8IYM2 578 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 SUPT20HQ8NEM7 779 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 GDAP1Q8TB36 358 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 ALG3Q92685 438 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 FIZ1Q96SL8 496 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 FMO2Q99518 471 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 TAOK3Q9H2K8 898 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 TCEAL9Q9UHQ7 104 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 ZNRF3Q9ULT6 936 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 FRMD4BQ9Y2L6 1034 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 PCDHGC5Q9Y5F6 944 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 MEFVO15553 781 aaPredicted RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 PIAS1O75925 651 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 ITGB5P18084 799 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 LDHDQ86WU2 507 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 EPS8L3Q8TE67 593 aaKnown RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 C1orf54Q8WWF1 131 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 TCP11Q8WWU5 503 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 ATG4AQ8WYN0 398 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 CEP63Q96MT8 703 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 HEMGNQ9BXL5 484 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 ZNF341Q9BYN7 854 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 UNC45AQ9H3U1 944 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 AZI2Q9H6S1 392 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 ARHGEF10LQ9HCE6 1279 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 KCNK9Q9NPC2 374 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 TELO2Q9Y4R8 837 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 DNAH12Q6ZR08 3092 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 CCDC169A6NNP5 214 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 GNA14O95837 355 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 FTLP02792 175 aaPredicted RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 RPL13P26373 211 aaKnown RBP10.03□□□□□ -0.8
NDE1-201ENST00000396354 CDC25CP30307 473 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 RINT1Q6NUQ1 792 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 MMS22LQ6ZRQ5 1243 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 CAVIN3Q969G5 261 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 KLHL11Q9NVR0 708 aa10.03□□□□□ -0.8
NDE1-201ENST00000396354 TGFB1I1O43294 461 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 LCA5LO95447 670 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 CLTAP09496 248 aa10.02□□□□□ -0.81
NDE1-201ENST00000396354 HARSP12081 509 aaKnown RBP10.02□□□□□ -0.81
NDE1-201ENST00000396354 MYCLP12524 364 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms