RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 NBL1P41271 181 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 FKBP1AP62942 108 aaKnown RBP6.82□□□□□ -1.32
AP3S1-202ENST00000395548 SLC7A5Q01650 507 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 KIR3DS1Q14943 382 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 TMEM240Q5SV17 173 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 HEATR6Q6AI08 1181 aaKnown RBP6.82□□□□□ -1.32
AP3S1-202ENST00000395548 GADL1Q6ZQY3 521 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 ANKRD18AQ8IVF6 992 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 SLC44A5Q8NCS7 719 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 RTF1Q92541 710 aaKnown RBP6.82□□□□□ -1.32
AP3S1-202ENST00000395548 SEC16BQ96JE7 1060 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 CHAMP1Q96JM3 812 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 FCRL3Q96P31 734 aaPredicted RBP6.82□□□□□ -1.32
AP3S1-202ENST00000395548 HAUS7Q99871 368 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 FSD1Q9BTV5 496 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 CNTD2Q9H8S5 307 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 KLHL14Q9P2G3 628 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 PRKAG3Q9UGI9 489 aa6.82□□□□□ -1.32
AP3S1-202ENST00000395548 DDX20Q9UHI6 824 aaKnown RBP6.82□□□□□ -1.32
AP3S1-202ENST00000395548 ASH1LQ9NR48 2969 aaKnown RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 A0A0G2JLL6 359 aaPredicted RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 A0A1W2PQJ5 194 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 CBFA2T2O43439 604 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 PPM1BO75688 479 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 NASPP49321 788 aaPredicted RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 CBX2Q14781 532 aaPredicted RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 NR1I3Q14994 352 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 CCDC152Q4G0S7 254 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 HERC4Q5GLZ8 1057 aaPredicted RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 TCERG1LQ5VWI1 586 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 MFSD14CQ5VZR4 134 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 PRRT2Q7Z6L0 340 aaPredicted RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 ADAT2Q7Z6V5 191 aaKnown RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 EDAQ92838 391 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 ZDHHC15Q96MV8 337 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 TGIF2Q9GZN2 237 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 TDRD3Q9H7E2 651 aaKnown RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 UBE2ZQ9H832 354 aaPredicted RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 TNFRSF12AQ9NP84 129 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 RALYQ9UKM9 306 aaKnown RBP6.81□□□□□ -1.32
AP3S1-202ENST00000395548 PCDHAC2Q9Y5I4 1007 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 A0A0G2JMZ2 1700 aa6.81□□□□□ -1.32
AP3S1-202ENST00000395548 ZNF536O15090 1300 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 PRRC2BQ5JSZ5 2229 aaKnown RBP6.8□□□□□ -1.32
AP3S1-202ENST00000395548 TMEM221A6NGB7 291 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 NUDT19A8MXV4 375 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 H0Y858 1186 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 M0R296 226 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 TIMP1P01033 207 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 CD3EP07766 207 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 ATP2B1P20020 1258 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 CNGA1P29973 690 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 RGS2P41220 211 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 CCT4P50991 539 aaKnown RBP6.8□□□□□ -1.32
AP3S1-202ENST00000395548 MVKQ03426 396 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 PPP2R5DQ14738 602 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 PPP2R5EQ16537 467 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 GJC2Q5T442 439 aaPredicted RBP6.8□□□□□ -1.32
AP3S1-202ENST00000395548 MFSD5Q6N075 450 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 MORC1Q86VD1 984 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 TDRD7Q8NHU6 1098 aaKnown RBP6.8□□□□□ -1.32
AP3S1-202ENST00000395548 MICAL1Q8TDZ2 1067 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 MZB1Q8WU39 189 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 FAM89AQ96GI7 184 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 PTCHD1Q96NR3 888 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 TLR9Q9NR96 1032 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 STRIP2Q9ULQ0 834 aa6.8□□□□□ -1.32
AP3S1-202ENST00000395548 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.8□□□□□ -1.32
AP3S1-202ENST00000395548 DOCK3Q8IZD9 2030 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 GVINP1Q7Z2Y8 2422 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 IRS4O14654 1257 aaPredicted RBP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 IL9P15248 144 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 CASP7P55210 303 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 CORO7P57737 925 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 PABPC4Q13310 644 aaKnown RBP eCLIP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 SSPNQ14714 243 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 TAF7Q15545 349 aaPredicted RBP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 EEF1DP3Q658K8 133 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 TTLL10Q6ZVT0 673 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 COPS6Q7L5N1 327 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 TMC6Q7Z403 805 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 CCAR1Q8IX12 1150 aaKnown RBP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 TMEM199Q8N511 208 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 CERS5Q8N5B7 392 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 SHDQ96IW2 340 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 KLHL25Q9H0H3 589 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.79□□□□□ -1.32
AP3S1-202ENST00000395548 TMOD2Q9NZR1 351 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 INPP5FQ9Y2H2 1132 aa6.79□□□□□ -1.32
AP3S1-202ENST00000395548 MAP1BP46821 2468 aaKnown RBP6.78□□□□□ -1.32
AP3S1-202ENST00000395548 UTYO14607 1347 aa6.78□□□□□ -1.32
AP3S1-202ENST00000395548 COL4A6Q14031 1691 aa6.78□□□□□ -1.32
AP3S1-202ENST00000395548 DNAH14Q0VDD8 3507 aa6.78□□□□□ -1.32
AP3S1-202ENST00000395548 USP24Q9UPU5 2620 aa6.78□□□□□ -1.32
AP3S1-202ENST00000395548 DIAPH1O60610 1272 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms