RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 DRAP1Q14919 205 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 LMBRD2Q68DH5 695 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 ZNF571Q7Z3V5 609 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 FAM186BQ8IYM0 893 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 BSDC1Q9NW68 430 aaPredicted RBP9.47□□□□□ -0.89
RTN4-206ENST00000394611 MINPP1Q9UNW1 487 aa9.47□□□□□ -0.89
RTN4-206ENST00000394611 ENTPD5O75356 428 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 DDAH1O94760 285 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 ATF2P15336 505 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 UCHL3P15374 230 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 ALDH1B1P30837 517 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 KDSRQ06136 332 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.892e-6■■□□□ 11.4
RTN4-206ENST00000394611 ZNF394Q53GI3 561 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 SWT1Q5T5J6 900 aaKnown RBP9.46□□□□□ -0.89
RTN4-206ENST00000394611 STYK1Q6J9G0 422 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 CCDC62Q6P9F0 684 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 CEP128Q6ZU80 1094 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 ERMNQ8TAM6 284 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 PPP1R36Q96LQ0 422 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 LRRC37BQ96QE4 947 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 SH3GL2Q99962 352 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 ZNF287Q9HBT7 754 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 USP40Q9NVE5 1235 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 MYBP10242 640 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 MARCKSL1P49006 195 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 KCNA1Q09470 495 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 ODR4Q5SWX8 454 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 FYB2Q5VWT5 728 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 OLFML2BQ68BL8 750 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 UNC13DQ70J99 1090 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 JAMLQ86YT9 394 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 CPXCR1Q8N123 301 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 NAP1L3Q99457 506 aaPredicted RBP9.46□□□□□ -0.89
RTN4-206ENST00000394611 SYT17Q9BSW7 474 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 ARHGEF10LQ9HCE6 1279 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 MCM8Q9UJA3 840 aa9.46□□□□□ -0.89
RTN4-206ENST00000394611 TRAPPC3O43617 180 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 C21orf2O43822 256 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 ECEL1O95672 775 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 FTLP02792 175 aaPredicted RBP9.46□□□□□ -0.9
RTN4-206ENST00000394611 NQO1P15559 274 aaKnown RBP9.46□□□□□ -0.9
RTN4-206ENST00000394611 PSEN1P49768 467 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 USP4Q13107 963 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 ANKRD20A2Q5SQ80 823 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 ANKRD20A1Q5TYW2 823 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 ZBTB46Q86UZ6 589 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 TTLL6Q8N841 843 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 ZNF507Q8TCN5 953 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 MORC4Q8TE76 937 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 SPOCK2Q92563 424 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 CEP63Q96MT8 703 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 FAM161BQ96MY7 647 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 THAP2Q9H0W7 228 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 BCAS3Q9H6U6 928 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 SAYSD1Q9NPB0 183 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 SCOCQ9UIL1 159 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 ANAPC5Q9UJX4 755 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 C15orf41Q9Y2V0 281 aa9.46□□□□□ -0.9
RTN4-206ENST00000394611 USP15Q9Y4E8 981 aaPredicted RBP9.46□□□□□ -0.9
RTN4-206ENST00000394611 BBOX1O75936 387 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 EPHB2P29323 1055 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 CRYMQ14894 314 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 LRRC23Q53EV4 343 aaPredicted RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 FAM178BQ8IXR5 827 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 CEP95Q96GE4 821 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 SH3GL3Q99963 347 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 PIM2Q9P1W9 311 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 PPP1R9AQ9ULJ8 1098 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 PCDHA1Q9Y5I3 950 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 PASKQ96RG2 1323 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 TRAPPC10P48553 1259 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 MRPL12P52815 198 aaKnown RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 NAB2Q15742 525 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 MIIPQ5JXC2 388 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 ARL6IP4Q66PJ3 421 aaKnown RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 BZW1Q7L1Q6 419 aaKnown RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 IQCKQ8N0W5 287 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 ERLEC1Q96DZ1 483 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 C12orf65Q9H3J6 166 aaKnown RBP9.45□□□□□ -0.9
RTN4-206ENST00000394611 TMEM165Q9HC07 324 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 SLCO1B3Q9NPD5 702 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 ANLNQ9NQW6 1124 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 F8VZ95 297 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 UFL1O94874 794 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 BTDP43251 543 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 GPSM2P81274 684 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 EML3Q32P44 896 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 KIAA1755Q5JYT7 1200 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 PBKQ96KB5 322 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 RPS6KC1Q96S38 1066 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 LRRC27Q9C0I9 530 aa9.45□□□□□ -0.9
RTN4-206ENST00000394611 CNOT10Q9H9A5 744 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms