RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 THEM5Q8N1Q8 247 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 LRRC8CQ8TDW0 803 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 ASNSD1Q9NWL6 643 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 APEX2Q9UBZ4 518 aa17.74■□□□□ 0.43
SCN3B-202ENST00000392770 RPS6P62753 249 aaKnown RBP17.73■□□□□ 0.43
SCN3B-202ENST00000392770 ARL13BQ3SXY8 428 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 RNF139Q8WU17 664 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 FXR1P51114 621 aaKnown RBP eCLIP17.73■□□□□ 0.43
SCN3B-202ENST00000392770 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 GPATCH11Q8N954 259 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 SMARCAD1Q9H4L7 1026 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 GRID2IPA4D2P6 1211 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 SLC25A27O95847 323 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 ZBED1O96006 694 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 SHMT1P34896 483 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 DUOXA2Q1HG44 320 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 PPFIBP2Q8ND30 876 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 KIF12Q96FN5 646 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 DNAJC17Q9NVM6 304 aaKnown RBP17.73■□□□□ 0.43
SCN3B-202ENST00000392770 PITPNM2Q9BZ72 1349 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 ACOT2P49753 483 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 SNRNP35Q16560 246 aaKnown RBP17.73■□□□□ 0.43
SCN3B-202ENST00000392770 EDRF1Q3B7T1 1238 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 KIAA0391O15091 583 aaKnown RBP17.73■□□□□ 0.43
SCN3B-202ENST00000392770 CSPG5O95196 566 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 IFNAR2P48551 515 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 WDR24Q96S15 920 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 TBK1Q9UHD2 729 aa17.73■□□□□ 0.43
SCN3B-202ENST00000392770 SH3BP5O60239 455 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 KYAT1Q16773 422 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 SDCCAG8Q86SQ7 713 aaPredicted RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 PARK7Q99497 189 aaKnown RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 IP6K2Q9UHH9 426 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 PODXLO00592 558 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 GH1P01241 217 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 IL9RQ01113 521 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 MXD4Q14582 209 aaPredicted RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 E4F1Q66K89 784 aaPredicted RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 RASGRP2Q7LDG7 609 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 PNMA8AQ86V59 439 aaPredicted RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 DNAAF3Q8N9W5 541 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 PDE1BQ01064 536 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 GSPT2Q8IYD1 628 aaKnown RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 SYT2Q8N9I0 419 aaPredicted RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 RUSC1Q9BVN2 902 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 HPSEQ9Y251 543 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 WTIPA6NIX2 430 aaPredicted RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 PPP6R3Q5H9R7 873 aaPredicted RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 TC2NQ8N9U0 490 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 STK33Q9BYT3 514 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 TYW5A2RUC4 315 aaKnown RBP17.72■□□□□ 0.43
SCN3B-202ENST00000392770 RFC5P40937 340 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 EMBQ6PCB8 327 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 RFFLQ8WZ73 363 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 MTFR1LQ9H019 292 aa17.72■□□□□ 0.43
SCN3B-202ENST00000392770 MRC1P22897 1456 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
SCN3B-202ENST00000392770 MED24O75448 989 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 ZRANB2O95218 330 aaKnown RBP eCLIP17.71■□□□□ 0.43
SCN3B-202ENST00000392770 PSMC1P62191 440 aaKnown RBP17.71■□□□□ 0.43
SCN3B-202ENST00000392770 XRRA1Q6P2D8 792 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 ARHGAP24Q8N264 748 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 BBS5Q8N3I7 341 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 ACAP3Q96P50 834 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.43
SCN3B-202ENST00000392770 PFDN4Q9NQP4 134 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 MAFGO15525 162 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 RIOX1Q9H6W3 641 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 SNX24Q9Y343 169 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 CD44P16070 742 aaKnown RBP17.71■□□□□ 0.43
SCN3B-202ENST00000392770 GTF2A1P52655 376 aaPredicted RBP17.71■□□□□ 0.43
SCN3B-202ENST00000392770 TRIM72Q6ZMU5 477 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 ANKRD13AQ8IZ07 590 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 PLAAQ9Y263 795 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 RTN2O75298 545 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 UCHL3P15374 230 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 ADORA2BP29275 332 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 RAPH1Q70E73 1250 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 KCTD17Q8N5Z5 321 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 GPRASP2Q96D09 838 aa17.71■□□□□ 0.43
SCN3B-202ENST00000392770 RNF25Q96BH1 459 aaPredicted RBP17.71■□□□□ 0.42
SCN3B-202ENST00000392770 WNT8AQ9H1J5 351 aa17.71■□□□□ 0.42
SCN3B-202ENST00000392770 KCNQ5Q9NR82 932 aa17.71■□□□□ 0.42
SCN3B-202ENST00000392770 NOVA2Q9UNW9 492 aaKnown RBP17.71■□□□□ 0.42
SCN3B-202ENST00000392770 GRIN3BO60391 1043 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 SREBF1P36956 1147 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 TAF1CQ15572 869 aaPredicted RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 GTF3C2Q8WUA4 911 aaPredicted RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 NOC2LQ9Y3T9 749 aaKnown RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 SPDYE16A6NNV3 312 aaPredicted RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 NXNQ6DKJ4 435 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 STK38LQ9Y2H1 464 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 FHOD1Q9Y613 1164 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 RASGRF2O14827 1237 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms