RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 COL20A1Q9P218 1284 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 ARFGEF1Q9Y6D6 1849 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 TESPA1A2RU30 521 aaPredicted RBP11.71□□□□□ -0.54
BRF1-204ENST00000392557 CCDC188H7C350 402 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 FSBPO95073 299 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 MMEP08473 750 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 TRIM49P0CI25 452 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 TRIM49CP0CI26 452 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.54
BRF1-204ENST00000392557 CIITAP33076 1130 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 TGFB2P61812 414 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 HOOK3Q86VS8 718 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 HVCN1Q96D96 273 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 ELAC2Q9BQ52 826 aaKnown RBP11.71□□□□□ -0.54
BRF1-204ENST00000392557 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 RPAP3Q9H6T3 665 aaPredicted RBP11.71□□□□□ -0.54
BRF1-204ENST00000392557 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.54
BRF1-204ENST00000392557 CNOT8Q9UFF9 292 aaKnown RBP11.71□□□□□ -0.54
BRF1-204ENST00000392557 CAND2O75155 1236 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 SLITRK3O94933 977 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 PRELPP51888 382 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 ANGEL2Q5VTE6 544 aaKnown RBP11.7□□□□□ -0.54
BRF1-204ENST00000392557 RINT1Q6NUQ1 792 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 CCDC105Q8IYK2 499 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 LXNQ9BS40 222 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 TEKT3Q9BXF9 490 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 GANQ9H2C0 597 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 FAM114A2Q9NRY5 505 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 PIK3CDO00329 1044 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 EVI5O60447 810 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 C10orf76Q5T2E6 689 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 FKBP1CQ5VVH2 108 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 MIER3Q7Z3K6 550 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 IRF2BP2Q7Z5L9 587 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 TBC1D1Q86TI0 1168 aaPredicted RBP11.7□□□□□ -0.54
BRF1-204ENST00000392557 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 FAM186BQ8IYM0 893 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 MREGQ8N565 214 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 AZI2Q9H6S1 392 aa11.7□□□□□ -0.54
BRF1-204ENST00000392557 DNAJC17Q9NVM6 304 aaKnown RBP11.7□□□□□ -0.54
BRF1-204ENST00000392557 GEMIN8Q9NWZ8 242 aaKnown RBP11.7□□□□□ -0.54
BRF1-204ENST00000392557 ARHGEF35A5YM69 484 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 EYA4O95677 639 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 MMP14P50281 582 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 HMGCS2P54868 508 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 MESDQ14696 234 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 NAA25Q14CX7 972 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 LRRC14Q15048 493 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 COBLL1Q53SF7 1204 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ZNF746Q6NUN9 644 aaPredicted RBP11.69□□□□□ -0.54
BRF1-204ENST00000392557 DLK2Q6UY11 383 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 HS2ST1Q7LGA3 356 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 KIRREL3Q8IZU9 778 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ANKRD42Q8N9B4 389 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 CCDC197Q8NCU1 140 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 RBM46Q8TBY0 533 aaKnown RBP11.69□□□□□ -0.54
BRF1-204ENST00000392557 INTS9Q9NV88 658 aaKnown RBP11.69□□□□□ -0.54
BRF1-204ENST00000392557 RASAL2Q9UJF2 1139 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 NR2E1Q9Y466 385 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 TMEM150BA6NC51 233 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 TBC1D12O60347 775 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ICAM1P05362 532 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 VCAM1P19320 739 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
BRF1-204ENST00000392557 ODR4Q5SWX8 454 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 AADACL2Q6P093 401 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 CYB5D1Q6P9G0 228 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 LRIG3Q6UXM1 1119 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ACTRT1Q8TDG2 376 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 WNK4Q96J92 1243 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 TAAR1Q96RJ0 339 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 YY1AP1Q9H869 796 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 KCNH7Q9NS40 1196 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 WRAP73Q9P2S5 460 aaPredicted RBP11.69□□□□□ -0.54
BRF1-204ENST00000392557 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 TRAPPC3O43617 180 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 EXOC3O60645 756 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 PSMD10O75832 226 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 CYP3A4P08684 503 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 CHN1P15882 459 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ITGB5P18084 799 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 FGFR4P22455 802 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ZFYVE27Q5T4F4 411 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 TMC3Q7Z5M5 1100 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 CD302Q8IX05 232 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 FAM178BQ8IXR5 827 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 NEK9Q8TD19 979 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 ATG4CQ96DT6 458 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 CHMP6Q96FZ7 201 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 PPP1R9AQ9ULJ8 1098 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 FRMD4BQ9Y2L6 1034 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 PCDHA2Q9Y5H9 948 aa11.69□□□□□ -0.54
BRF1-204ENST00000392557 DDX3XO00571 662 aaKnown RBP eCLIP11.68□□□□□ -0.54
BRF1-204ENST00000392557 FERP16591 822 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 VPS41P49754 854 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 SMTNP53814 917 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms