RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 PMM2O15305 246 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 VAV2P52735 878 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 ENPEPQ07075 957 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 STRN3Q13033 797 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 SNRNP35Q16560 246 aaKnown RBP23.24■■□□□ 1.31
SPHK1-202ENST00000392496 TMEM63BQ5T3F8 832 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 IER5Q5VY09 327 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 TRIM50Q86XT4 487 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 ZSWIM2Q8NEG5 633 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 MAML3Q96JK9 1138 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 TMEM134Q9H6X4 195 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 ZNF263O14978 683 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 CTIFO43310 598 aaKnown RBP23.24■■□□□ 1.31
SPHK1-202ENST00000392496 PIGRP01833 764 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 ADRB2P07550 413 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 MARK3P27448 753 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 JAM2P57087 298 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 INHBEP58166 350 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 CETN1Q12798 172 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 GRM1Q13255 1194 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 TDRD12Q587J7 1177 aaKnown RBP23.24■■□□□ 1.31
SPHK1-202ENST00000392496 TCP11Q8WWU5 503 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 POMGNT1Q8WZA1 660 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 EMID1Q96A84 441 aaPredicted RBP23.24■■□□□ 1.31
SPHK1-202ENST00000392496 JAKMIP2Q96AA8 810 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 BICD1Q96G01 975 aa23.24■■□□□ 1.31
SPHK1-202ENST00000392496 JPH2Q9BR39 696 aaPredicted RBP23.24■■□□□ 1.31
SPHK1-202ENST00000392496 IGKV6-21A0A0C4DH24 114 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 LRRIQ4A6NIV6 560 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 KRT86O43790 486 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 HBP1O60381 514 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 SNAI1O95863 264 aaPredicted RBP23.23■■□□□ 1.31
SPHK1-202ENST00000392496 SLC10A3P09131 477 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 DLG4P78352 724 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 NOGQ13253 232 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 ZNF569Q5MCW4 686 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 C1orf220Q5T0J3 134 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 CBWD2Q8IUF1 395 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 EHBP1Q8NDI1 1231 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 TSGA10Q9BZW7 698 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 INTS2Q9H0H0 1204 aaKnown RBP23.23■■□□□ 1.31
SPHK1-202ENST00000392496 SLC5A4Q9NY91 659 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 BZW2Q9Y6E2 419 aaKnown RBP23.23■■□□□ 1.31
SPHK1-202ENST00000392496 STYXL1Q9Y6J8 313 aa23.23■■□□□ 1.31
SPHK1-202ENST00000392496 GOLGA8IPA6NC78 632 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 GOLGA8JA6NMD2 632 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 ZBTB42B2RXF5 422 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 RBAK-RBAKDNI3L0D1 243 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 KIAA0391O15091 583 aaKnown RBP23.22■■□□□ 1.31
SPHK1-202ENST00000392496 ABL1P00519 1130 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 CYP27A1Q02318 531 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 CCDC122Q5T0U0 273 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 IQCEQ6IPM2 695 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 GPD1LQ8N335 351 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 MSL3Q8N5Y2 521 aaKnown RBP23.22■■□□□ 1.31
SPHK1-202ENST00000392496 PLEKHO2Q8TD55 490 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 TMC2Q8TDI7 906 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 SAAL1Q96ER3 474 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 MFSD14AQ96MC6 490 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 PCDHA13Q9Y5I0 950 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 K7ERI5 159 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 IGF2BP3O00425 579 aaKnown RBP eCLIP23.22■■□□□ 1.313e-6■□□□□ 11.2
SPHK1-202ENST00000392496 URI1O94763 535 aaPredicted RBP23.22■■□□□ 1.31
SPHK1-202ENST00000392496 RFX1P22670 979 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 LIG4P49917 911 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 PPP3CAQ08209 521 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 KLHL30Q0D2K2 578 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 SREBF2Q12772 1141 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 CAPSQ13938 189 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 IRF2BP2Q7Z5L9 587 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 REM2Q8IYK8 340 aaPredicted RBP23.22■■□□□ 1.31
SPHK1-202ENST00000392496 TXLNBQ8N3L3 684 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 KIAA1586Q9HCI6 787 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 ERAP1Q9NZ08 941 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 GUCA1BQ9UMX6 200 aa23.22■■□□□ 1.31
SPHK1-202ENST00000392496 ADCY3O60266 1144 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 SLU7O95391 586 aaKnown RBP23.21■■□□□ 1.31
SPHK1-202ENST00000392496 PRKCIP41743 596 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 HSP90AA2PQ14568 343 aaPredicted RBP23.21■■□□□ 1.31
SPHK1-202ENST00000392496 USP37Q86T82 979 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 SLC35F6Q8N357 371 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 PPTC7Q8NI37 304 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 LMO3Q8TAP4 145 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 TINF2Q9BSI4 451 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 STK33Q9BYT3 514 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 IFIH1Q9BYX4 1025 aaKnown RBP23.21■■□□□ 1.31
SPHK1-202ENST00000392496 ABHD16BQ9H3Z7 469 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 APEX2Q9UBZ4 518 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 CPA4Q9UI42 421 aa23.21■■□□□ 1.31
SPHK1-202ENST00000392496 KIF5AQ12840 1032 aa23.2■■□□□ 1.3
SPHK1-202ENST00000392496 MXD4Q14582 209 aaPredicted RBP23.2■■□□□ 1.3
SPHK1-202ENST00000392496 EPC2Q52LR7 807 aa23.2■■□□□ 1.3
SPHK1-202ENST00000392496 SLFN12LQ6IEE8 588 aa23.2■■□□□ 1.3
SPHK1-202ENST00000392496 FMNL3Q8IVF7 1028 aa23.2■■□□□ 1.3
SPHK1-202ENST00000392496 PARD3BQ8TEW8 1205 aa23.2■■□□□ 1.3
SPHK1-202ENST00000392496 PRPF31Q8WWY3 499 aaKnown RBP23.2■■□□□ 1.3
SPHK1-202ENST00000392496 CAPNS2Q96L46 248 aa23.2■■□□□ 1.3
SPHK1-202ENST00000392496 AJAP1Q9UKB5 411 aaPredicted RBP23.2■■□□□ 1.3
SPHK1-202ENST00000392496 TRPC6Q9Y210 931 aa23.2■■□□□ 1.3
SPHK1-202ENST00000392496 USP20Q9Y2K6 914 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms