RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 TRPM7Q96QT4 1865 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 C10orf71Q711Q0 1435 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 A0A0D9SFI3 127 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TARSL2A2RTX5 802 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 EME2A4GXA9 379 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 LRRIQ3A6PVS8 624 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 GOLGA8AA7E2F4 631 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 SCAMP3O14828 347 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 P4HA2O15460 535 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RNF113AO15541 343 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TREHO43280 583 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 PFDN1O60925 122 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TBCAO75347 108 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 IDH1O75874 414 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TBC1D8O95759 1140 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 LDHBP07195 334 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ZFYP08048 801 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RPSAP08865 295 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 MMP10P09238 476 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC166P0CW27 439 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 IDO1P14902 403 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 FGFR2P21802 821 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RPL13P26373 211 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ERCC5P28715 1186 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TM4SF1P30408 202 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ALDH3A1P30838 453 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CA8P35219 290 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 PDE6BP35913 854 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CCT6AP40227 531 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 PHKA1P46020 1223 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RAP1GAPP47736 663 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 KCNJ6P48051 423 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 EVCP57679 992 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RPS8P62241 208 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 UBE2HP62256 183 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ZBED6P86452 979 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 EHHADHQ08426 723 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 APOBRQ0VD83 1088 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ZBTB17Q13105 803 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 PABPC4Q13310 644 aaKnown RBP eCLIP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 IKZF1Q13422 519 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TUBB2AQ13885 445 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TRIM29Q14134 588 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CNGA3Q16281 694 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 IFI16Q16666 785 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CLPPQ16740 277 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 USH1GQ495M9 461 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 MCMDC2Q4G0Z9 681 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ANGEL2Q5VTE6 544 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ISM2Q6H9L7 571 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 MTHFD1LQ6UB35 978 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 MPZL3Q6UWV2 235 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 SEZ6L2Q6UXD5 910 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CEP128Q6ZU80 1094 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TMC4Q7Z404 712 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 DEFB132Q7Z7B7 95 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TMEM110Q86TL2 294 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ZSWIM9Q86XI8 627 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 LRRC49Q8IUZ0 686 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CCNJLQ8IV13 435 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 REXO1L1PQ8IX06 675 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 LMNTD2Q8IXW0 634 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 SMYD4Q8IYR2 804 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 CCAR2Q8N163 923 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 GALNT15Q8N3T1 639 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TOP6BLQ8N6T0 577 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 SMYD1Q8NB12 490 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 SPATA5Q8NB90 893 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 HNRNPLLQ8WVV9 542 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RSPH1Q8WYR4 309 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TBC1D5Q92609 795 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RABGGTAQ92696 567 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 P3H4Q92791 437 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 KAT2BQ92831 832 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 PPP2R3CQ969Q6 453 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TBC1D31Q96DN5 1066 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 EDC3Q96F86 508 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 MASTLQ96GX5 879 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 LIN37Q96GY3 246 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF512BQ96KM6 892 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 FAM84AQ96KN4 292 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 FAM227BQ96M60 508 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 JAKMIP1Q96N16 626 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TOX2Q96NM4 488 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 IWS1Q96ST2 819 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 SLX1AQ9BQ83 275 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TUBB2BQ9BVA1 445 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 BRIP1Q9BX63 1249 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 MOV10L1Q9BXT6 1211 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 YIPF3Q9GZM5 350 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 LSG1Q9H089 658 aaKnown RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 RSPH9Q9H1X1 276 aaPredicted RBP2.88□□□□□ -1.95
TRAV41-201ENST00000390468 EHD4Q9H223 541 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 BHMT2Q9H2M3 363 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 VCXQ9H320 206 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 VCPKMTQ9H867 229 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ZWILCHQ9H900 591 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 ZFYVE1Q9HBF4 777 aa2.88□□□□□ -1.95
TRAV41-201ENST00000390468 TMEM165Q9HC07 324 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms