RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 OCEL1Q9H607 264 aa15.76■□□□□ 0.11
VPS9D1-201ENST00000389386 DENND2DQ9H6A0 471 aaPredicted RBP15.76■□□□□ 0.11
VPS9D1-201ENST00000389386 KANSL2Q9H9L4 492 aa15.76■□□□□ 0.11
VPS9D1-201ENST00000389386 BLOC1S4Q9NUP1 217 aa15.76■□□□□ 0.11
VPS9D1-201ENST00000389386 TNS1Q9HBL0 1735 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-201ENST00000389386 TRAF5O00463 557 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 CACNA2D1P54289 1103 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 NPEPPSP55786 919 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 MAPK7Q13164 816 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 MTFR1Q15390 333 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 VSIG1Q86XK7 387 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 TRIM59Q8IWR1 403 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 ANKRD42Q8N9B4 389 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 GDAP1Q8TB36 358 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 AZIN2Q96A70 460 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 NDNQ99608 321 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 TIPINQ9BVW5 301 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 DCLRE1BQ9H816 532 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 PRDM16Q9HAZ2 1276 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 HAO1Q9UJM8 370 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 AMFRQ9UKV5 643 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 BZW2Q9Y6E2 419 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 MROH7Q68CQ1 1323 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 COL24A1Q17RW2 1714 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 RGL2O15211 777 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 DDX3YO15523 660 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 EYA4O95677 639 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 GH1P01241 217 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 H2AFZP0C0S5 128 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 TARSP26639 723 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 PTGIRP43119 386 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 CCDC88AQ3V6T2 1871 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 H2AFVQ71UI9 128 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 SLC7A6OSQ96CW6 309 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 FAM192AQ9GZU8 254 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 DUOX1Q9NRD9 1551 aa15.75■□□□□ 0.11
VPS9D1-201ENST00000389386 TSPY2A6NKD2 308 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 ECE2O60344 883 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 FGRP09769 529 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 SETSIPP0DME0 302 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 RARGP13631 454 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 GSTT1P30711 240 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 VHLP40337 213 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 RCN2Q14257 317 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 MYBPC3Q14896 1274 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 INTS8Q75QN2 995 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 PTPRN2Q92932 1015 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 GRAMD1AQ96CP6 724 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 OPTNQ96CV9 577 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 MTRF1LQ9UGC7 380 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 TECP42680 631 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 PRPF4BQ13523 1007 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 CCNJLQ8IV13 435 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 ERP27Q96DN0 273 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 CALML4Q96GE6 196 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 KIAA1683Q9H0B3 1180 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 KCNK9Q9NPC2 374 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 DNAAF2Q9NVR5 837 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 STOML1Q9UBI4 398 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 RPL26L1Q9UNX3 145 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 DIS3Q9Y2L1 958 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 DLEC1Q9Y238 1755 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 ATP8B3O60423 1300 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 ATP9AO75110 1047 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 LMNAP02545 664 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 T-ENOLP0DO92 83 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 EPHB2P29323 1055 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 GPSM2P81274 684 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 OCRLQ01968 901 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 GRB10Q13322 594 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 GRAPQ13588 217 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 LONRF1Q17RB8 773 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 DPY19L2P1Q6NXN4 242 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 GRAPLQ8TC17 118 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 GATA6Q92908 595 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 PPP1R12CQ9BZL4 782 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 USP40Q9NVE5 1235 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 ATXN10Q9UBB4 475 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 RASAL2Q9UJF2 1139 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 PPP1R9AQ9ULJ8 1098 aa15.74■□□□□ 0.11
VPS9D1-201ENST00000389386 LGR5O75473 907 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 ECEL1O95672 775 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 LDHBP07195 334 aaKnown RBP15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 SKIP12755 728 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 SCNN1BP51168 640 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 SETDB1Q15047 1291 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 SLC15A2Q16348 729 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 MYOCDQ8IZQ8 938 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 DAGLBQ8NCG7 672 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 CFAP61Q8NHU2 1237 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 LRRC8CQ8TDW0 803 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 MAGEB18Q96M61 343 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 CEP63Q96MT8 703 aa15.73■□□□□ 0.11
VPS9D1-201ENST00000389386 CHKBQ9Y259 395 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms