RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 TAL1P17542 331 aaPredicted RBP6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 RPL13P26373 211 aaKnown RBP6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 ECHS1P30084 290 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 IL12RB1P42701 662 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 PER3P56645 1201 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 RHBDL3P58872 404 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 TOP3AQ13472 1001 aaPredicted RBP6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 COBLL1Q53SF7 1204 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 REXO1L1PQ8IX06 675 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 PRR18Q8N4B5 295 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 PPP1R14CQ8TAE6 165 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 FNIP1Q8TF40 1166 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 ZCCHC14Q8WYQ9 949 aaKnown RBP6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 DPF2Q92785 391 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 GCDHQ92947 438 aaPredicted RBP6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 PWWP2AQ96N64 755 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 UHRF1Q96T88 793 aaPredicted RBP6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 TMEM168Q9H0V1 697 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 MANSC1Q9H8J5 431 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 SCOCQ9UIL1 159 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 IPPQ9Y573 584 aa6.86□□□□□ -1.31
RNU6-40P-201ENST00000384254 TCAF2A6NFQ2 919 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 DDX3XO00571 662 aaKnown RBP eCLIP6.85□□□□□ -1.311e-22■■■■□ 23.5
RNU6-40P-201ENST00000384254 PLA2G1BP04054 148 aaKnown RBP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 COL6A1P12109 1028 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 ZNF28P17035 718 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 GLDCP23378 1020 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 CTSSP25774 331 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 SAFBQ15424 915 aaKnown RBP eCLIP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 C3orf36Q3SXR2 165 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 SYCP2LQ5T4T6 812 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 CCDC149Q6ZUS6 474 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 SYDE1Q6ZW31 735 aaPredicted RBP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 TTC7BQ86TV6 843 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 RHOT1Q8IXI2 618 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 DRC7Q8IY82 874 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 Q8N3U1 123 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 PJA1Q8NG27 643 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 FBXO41Q8TF61 875 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 NKD2Q969F2 451 aaPredicted RBP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 PPP1R16BQ96T49 567 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 CARD11Q9BXL7 1154 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 C14orf93Q9H972 538 aaKnown RBP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 BARX1Q9HBU1 254 aaPredicted RBP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 TDP1Q9NUW8 608 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 USP25Q9UHP3 1055 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 CNOT6Q9ULM6 557 aaKnown RBP6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 FAM50BQ9Y247 325 aa6.85□□□□□ -1.31
RNU6-40P-201ENST00000384254 A0A1W2PR48 441 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 SLC16A6O15403 523 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 TMEM127O75204 238 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 KLHL18O94889 574 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 FTLP02792 175 aaPredicted RBP6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 IFIT2P09913 472 aaKnown RBP6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 MYBP10242 640 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 GAAP10253 952 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 PHKG2P15735 406 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 ADSLP30566 484 aaPredicted RBP6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 PPP3CAQ08209 521 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 ZNF568Q3ZCX4 644 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 DAAM2Q86T65 1068 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 RSPH3Q86UC2 560 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 TMEFF1Q8IYR6 380 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 BCL6BQ8N143 479 aaPredicted RBP6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 NUDT10Q8NFP7 164 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 ZNF480Q8WV37 535 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 SNX33Q8WV41 574 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 KAT5Q92993 513 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 LPPQ93052 612 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 RGMAQ96B86 450 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 NUDT11Q96G61 164 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 MPHOSPH6Q99547 160 aaKnown RBP6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 ZNF700Q9H0M5 742 aa6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.84□□□□□ -1.31
RNU6-40P-201ENST00000384254 UBXN7O94888 489 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 PI3P19957 117 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 EDNRBP24530 442 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 RRADP55042 308 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 IL10RAQ13651 578 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 USP10Q14694 798 aaKnown RBP6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 UBE3CQ15386 1083 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 ZNF385BQ569K4 471 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 C19orf54Q5BKX5 351 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 PRR31Q5SQ13 230 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 Q6ZUG5 572 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 CHST15Q7LFX5 561 aaPredicted RBP6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 TAS1R1Q7RTX1 841 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 C11orf96Q7Z7L8 435 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 SAPCD2Q86UD0 394 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 SAMD3Q8N6K7 520 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 PPP1R35Q8TAP8 253 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 FAM84AQ96KN4 292 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 RPS6KC1Q96S38 1066 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 SLC38A3Q99624 504 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 POLHQ9Y253 713 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 PCDHA13Q9Y5I0 950 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 COMMD10Q9Y6G5 202 aa6.83□□□□□ -1.32
RNU6-40P-201ENST00000384254 ANO9A1A5B4 782 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms