RNA–Protein interactions for RNA: ENST00000383931.1

RNU6-1039P-201, Transcript of RNA, U6 small nuclear 1039, pseudogene, humanhuman

BASIC

Gene RNU6-1039P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1039P-201ENST00000383931 NKX2-4Q9H2Z4 354 aa0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 NCOA5Q9HCD5 579 aaKnown RBP0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 KCNQ5Q9NR82 932 aa0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 NCDNQ9UBB6 729 aa0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 DSEQ9UL01 958 aa0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 EMC9Q9Y3B6 208 aa0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SUPT16HQ9Y5B9 1047 aaKnown RBP0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 WNT6Q9Y6F9 365 aa0.58□□□□□ -2.32
RNU6-1039P-201ENST00000383931 COL2A1P02458 1487 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 IGKV6D-41A0A0C4DH26 115 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ANTXRLA6NF34 631 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 DIRC3C9JPN6 131 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SOCS5O75159 536 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CDKL5O76039 1030 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TOX4O94842 621 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 JUNP05412 331 aaKnown RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 LDHBP07195 334 aaKnown RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 VSIG10L2P0DP72 767 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SFPQP23246 707 aaKnown RBP eCLIP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 MC4RP32245 332 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ECE1P42892 770 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SOX10P56693 466 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 MXRA7P84157 204 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 HOXA4Q00056 320 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 NHLH2Q02577 135 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TESK1Q15569 626 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 FAM214AQ32MH5 1076 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 GNPTABQ3T906 1256 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TMEM119Q4V9L6 283 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PDCD4Q53EL6 469 aaKnown RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TSTD2Q5T7W7 516 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 BTBD8Q5XKL5 378 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 LARP1BQ659C4 914 aaKnown RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ARMC6Q6NXE6 501 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 FAM83AQ86UY5 434 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CMTM4Q8IZR5 234 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CRACR2BQ8N4Y2 399 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ZBTB38Q8NAP3 1195 aaPredicted RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 VCPIP1Q96JH7 1222 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PDCD2LQ9BRP1 358 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CASS4Q9NQ75 786 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 IGSF5Q9NSI5 407 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TRMT13Q9NUP7 481 aaKnown RBP0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 UBP1Q9NZI7 540 aa0.57□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PPP6CO00743 305 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 RTL8CO15255 209 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 HOXA3O43365 443 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 DNAJC6O75061 913 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 BAG4O95429 457 aaKnown RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 MPIG6BO95866 241 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SERPINB2P05120 415 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SPATA31D3P0C874 917 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 GNAT1P11488 350 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PTPN1P18031 435 aaKnown RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 RHCEP18577 417 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 GUCY2CP25092 1073 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 AOAHP28039 575 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 EIF4A3P38919 411 aaKnown RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ECI1P42126 302 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CDKN2AP42771 156 aaKnown RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SPIRE1Q08AE8 756 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 APOBRQ0VD83 1088 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TWIST1Q15672 202 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 MRGPRG-AS1Q2M3A8 158 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ACBD5Q5T8D3 534 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 B4GALNT3Q6L9W6 998 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ZNF66Q6ZN08 573 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SPATA31D4Q6ZUB0 917 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PPIL6Q8IXY8 311 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 NANOGP1Q8N7R0 232 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PLA2G15Q8NCC3 412 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 BVESQ8NE79 360 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 ZNF296Q8WUU4 475 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SLITRK1Q96PX8 696 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 AIFM2Q9BRQ8 373 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 GATA5Q9BWX5 397 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CD244Q9BZW8 370 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 RNF19AQ9NV58 838 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TBCCD1Q9NVR7 557 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 UCKL1Q9NWZ5 548 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 BTBD7Q9P203 1132 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PPARGC1AQ9UBK2 798 aaKnown RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 APEX2Q9UBZ4 518 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 DENND2AQ9ULE3 1009 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PCDHB10Q9UN67 800 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 FPGT-TNNI3KV9GXZ4 949 aa0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 FCGBPQ9Y6R7 5405 aaPredicted RBP0.56□□□□□ -2.32
RNU6-1039P-201ENST00000383931 FAM90A27PA6NNH2 459 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 KCNU1A8MYU2 1149 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 NOP56O00567 594 aaKnown RBP0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SLC28A2O43868 658 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CYP2D6P10635 497 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 PRG2P13727 222 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 IRF9Q00978 393 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 SLC7A5Q01650 507 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 MAP3K12Q12852 859 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 TRIP6Q15654 476 aaKnown RBP0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 CEP78Q5JTW2 689 aa0.55□□□□□ -2.32
RNU6-1039P-201ENST00000383931 HABP4Q5JVS0 413 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms