RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 DDX17Q92841 729 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 A0A1W2PQC6 194 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 XPO1O14980 1071 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 CDH16O75309 829 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 LRRC31Q6UY01 552 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 ALKBH8Q96BT7 664 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 TRIM8Q9BZR9 551 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 CDH2P19022 906 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 PRCPP42785 496 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 SCTRP47872 440 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 GPR141Q7Z602 305 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 SNX19Q92543 992 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 MRGBPQ9NV56 204 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 PZPP20742 1482 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 ABL1P00519 1130 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 RUNX1T1Q06455 604 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 TMC5Q6UXY8 1006 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 ABCC10Q5T3U5 1492 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 TBCCQ15814 346 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 UNC13DQ70J99 1090 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 EXOC8Q8IYI6 725 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 EDEM3Q9BZQ6 932 aa13.16□□□□□ -0.3
SRGAP3-202ENST00000383836 TTC26A0AVF1 554 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 DMPKQ09013 629 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 KCNA1Q09470 495 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 TCP10Q12799 353 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 POLA2Q14181 598 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 ZNF564Q8TBZ8 553 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 MXD3Q9BW11 206 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 HEMGNQ9BXL5 484 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 PARVBQ9HBI1 364 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 PFASO15067 1338 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 NFIBO00712 420 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 KLHL2O95198 593 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 ZNF577Q9BSK1 485 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 PPCSQ9HAB8 311 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 ERFP50548 548 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 UBE3AQ05086 875 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 IMPG1Q17R60 797 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 SFR1Q86XK3 245 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 CLEC4FQ8N1N0 589 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 OPTNQ96CV9 577 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 CATSPER2Q96P56 530 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 CNOT8Q9UFF9 292 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 SLC4A1P02730 911 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 CDC25AP30304 524 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 NQO1P15559 274 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 CDC27P30260 824 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 KRT17Q04695 432 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 CCNYL1Q8N7R7 359 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 ANGPT2O15123 496 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 BTKQ06187 659 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 B4GALNT2Q8NHY0 566 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 MS4A14Q96JA4 679 aa13.15□□□□□ -0.3
SRGAP3-202ENST00000383836 PRDM15P57071 1507 aaPredicted RBP13.15□□□□□ -0.31
SRGAP3-202ENST00000383836 RASSF9O75901 435 aa13.15□□□□□ -0.31
SRGAP3-202ENST00000383836 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.31
SRGAP3-202ENST00000383836 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.31
SRGAP3-202ENST00000383836 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.31
SRGAP3-202ENST00000383836 TYW5A2RUC4 315 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 CALB1P05937 261 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 PLEKHM3Q6ZWE6 761 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 HDDC2Q7Z4H3 204 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 TAGAPQ8N103 731 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 NSL1Q96IY1 281 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 RNPC3Q96LT9 517 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 ZNF211Q13398 564 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 ARL13BQ3SXY8 428 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 RIN2Q8WYP3 895 aaPredicted RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 FAM149B1Q96BN6 582 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 NDEL1Q9GZM8 345 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 ERICH1Q86X53 443 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 TMA16Q96EY4 203 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 DNAJC12Q9UKB3 198 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 NECTIN1Q15223 517 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 FAM83BQ5T0W9 1011 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 KDM7AQ6ZMT4 941 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 MRPS26Q9BYN8 205 aaKnown RBP13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 PTPRTO14522 1441 aa13.14□□□□□ -0.31
SRGAP3-202ENST00000383836 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms